RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PAIP2Q9BPZ3 127 aaKnown RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 GATA5Q9BWX5 397 aaPredicted RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 VN1R1Q9GZP7 353 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 ING2Q9H160 280 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 C12orf65Q9H3J6 166 aaKnown RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 DDX31Q9H8H2 851 aaKnown RBP8.62□□□□□ -1.03
NUP54-207ENST00000508583 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 PRDM7Q9NQW5 492 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 P4HTMQ9NXG6 502 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 KCNMB2Q9Y691 235 aa8.62□□□□□ -1.03
NUP54-207ENST00000508583 CCDC88CQ9P219 2028 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 LOC400499M0QZD8 3231 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 LOC102723996A0A087X1L8 192 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 NSG1A0A0A6YYJ2 146 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 A0A0G2JN53 185 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 SLC28A1O00337 649 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 SAP18O00422 153 aaKnown RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 PPP6CO00743 305 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 AZIN1O14977 448 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 RGS14O43566 566 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 DYRK3O43781 588 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 B4GALT2O60909 372 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 CNOT3O75175 753 aaKnown RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 CDC123O75794 336 aaPredicted RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 MYO1DO94832 1006 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 HSPA4LO95757 839 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 TBX6O95947 436 aaPredicted RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 HPP00738 406 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 PDYNP01213 254 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 UQCRHP07919 91 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 FGF4P08620 206 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 DHRS4L1P0CG22 281 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 CREB1P16220 341 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 CPN2P22792 545 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 POLE2P56282 527 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 TRA2BP62995 288 aaKnown RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 OLR1P78380 273 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 TNFRSF17Q02223 184 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ACTN3Q08043 901 aaPredicted RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 ACSM2AQ08AH3 577 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 SLC13A2Q13183 592 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 SLAMF1Q13291 335 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 SERTAD2Q14140 314 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 EXT1Q16394 746 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 HSP90B2PQ58FF3 399 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ARL13AQ5H913 290 aaPredicted RBP8.61□□□□□ -1.03
NUP54-207ENST00000508583 DCAF10Q5QP82 559 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 CCNYL2Q5T2Q4 361 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ATG16L1Q676U5 607 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ACSM2BQ68CK6 577 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ADNP2Q6IQ32 1131 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 RIPOR1Q6ZS17 1223 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 NDUFAF7Q7L592 441 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 TRIM46Q7Z4K8 759 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 PPP1R32Q7Z5V6 425 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 GPR180Q86V85 440 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 HPS6Q86YV9 775 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 CLYBLQ8N0X4 340 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 CA13Q8N1Q1 262 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 METTL4Q8N3J2 472 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 EFCAB3Q8N7B9 438 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ANKRD42Q8N9B4 389 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 OR5T3Q8NGG3 340 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 TANKQ92844 425 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 EXTL1Q92935 676 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 PTCHD1Q96NR3 888 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 LPAR4Q99677 370 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 TUBB6Q9BUF5 446 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 MECRQ9BV79 373 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 FAIM2Q9BWQ8 316 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 SHCBP1LQ9BZQ2 653 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 PRTFDC1Q9NRG1 225 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 ZNF225Q9UK10 706 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 FBXL4Q9UKA2 621 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 PCDHGB7Q9Y5F8 929 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 HS3ST3B1Q9Y662 390 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 NUP210LQ5VU65 1888 aa8.61□□□□□ -1.03
NUP54-207ENST00000508583 A0A0A6YYD5 115 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 ARGFXA6NJG6 315 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 EIF4E1BA6NMX2 242 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 SOCS6O14544 535 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 UBFD1O14562 309 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 SH3BGRLO75368 114 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 RSL1D1O76021 490 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 FURINP09958 794 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 FAM58BPP0C7Q3 252 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 NR2F6P10588 404 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 COX7A2P14406 83 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 DDX5P17844 614 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 BSGP35613 385 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 MAPK12P53778 367 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 ABCE1P61221 599 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 RHAGQ02094 409 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 STX4Q12846 297 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 KCNAB2Q13303 367 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 RUNX2Q13950 521 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 TERF2Q15554 542 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 CHI3L2Q15782 390 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 SPDYAQ5MJ70 313 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms