RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 H0Y8X5 98 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 GABRDO14764 452 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 GLSO94925 669 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 PDGFAP04085 211 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF37AP17032 561 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 TNFSF4P23510 183 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CXCR1P25024 350 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ACRV1P26436 265 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 RBL1P28749 1068 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 LTBRP36941 435 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 GP5P40197 560 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 RPL19P84098 196 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 TRA2AQ13595 282 aaKnown RBP eCLIP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 OTUD3Q5T2D3 398 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 DDI2Q5TDH0 399 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CES4AQ5XG92 561 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ULK3Q6PHR2 472 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 EIF3MQ7L2H7 374 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 BTLAQ7Z6A9 289 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SLC22A16Q86VW1 577 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SFTPA1Q8IWL2 248 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CNEP1R1Q8N9A8 125 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 C19orf47Q8N9M1 422 aaKnown RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 OR14L1PQ8NHC6 308 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ACTL9Q8TC94 416 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 MAGEE2Q8TD90 523 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 GIPC3Q8TF64 312 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 UCN3Q969E3 161 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 TBC1D20Q96BZ9 403 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 KLF6Q99612 283 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-208ENST00000508342 SLC39A3Q9BRY0 314 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 REEP1Q9H902 201 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CCNB1IP1Q9NPC3 277 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 CMTM6Q9NX76 183 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 GIN1Q9NXP7 522 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 ATXN10Q9UBB4 475 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 B4GALT6Q9UBX8 382 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 TAC3Q9UHF0 121 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 MSRB2Q9Y3D2 182 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 NEUROG3Q9Y4Z2 214 aa2.84□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0U1RQS6 177 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FAM221AA4D161 298 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 K7ESF4 209 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FFAR3O14843 346 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GPR42O15529 346 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GATBO75879 557 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SNAPINO95295 136 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OPN1LWP04000 364 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TSPAN19P0C672 248 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GZMAP12544 262 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 UGT1A4P22310 534 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 UGT1A3P35503 534 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PTGER3P43115 390 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CLDN6P56747 220 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 INCA1Q0VD86 236 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PLGLAQ15195 96 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZBTB6Q15916 424 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ANXA8L1Q5VT79 327 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MON1BQ7L1V2 547 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF572Q7Z3I7 529 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZCCHC7Q8N3Z6 543 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PIP4P2Q8N4L2 257 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MEIOBQ8N635 442 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CSNK1A1LQ8N752 337 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 C7orf57Q8NEG2 295 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OR4A15Q8NGL6 344 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 HDAC10Q969S8 669 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MS4A14Q96JA4 679 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 RNF157Q96PX1 679 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SLC22A12Q96S37 553 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CPNE1Q99829 537 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SH3GL2Q99962 352 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 RSRP1Q9BUV0 290 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SAP130Q9H0E3 1048 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CRISPLD1Q9H336 500 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 KLHL31Q9H511 634 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ENY2Q9NPA8 101 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF358Q9NW07 568 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 EIF3KQ9UBQ5 218 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF282Q9UDV7 671 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SPATA2Q9UM82 520 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OSGIN2Q9Y236 505 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 NDUFAF1Q9Y375 327 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MED31Q9Y3C7 131 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 STYXL1Q9Y6J8 313 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0A0MRY4 1105 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 LINC00854A0A1B0GVQ3 168 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 BTN3A3O00478 584 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF749O43361 778 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PRICKLE3O43900 615 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OTCP00480 354 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SERPINA5P05154 406 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 THRAP10827 490 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ITGA2P17301 1181 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GDF10P55107 478 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 AP1S2P56377 157 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 RGS8P57771 180 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PPP3R1P63098 170 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CDK16Q00536 496 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CD47Q08722 323 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms