RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 FAM53BQ14153 422 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 LACTB2Q53H82 288 aaPredicted RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 C18orf63Q68DL7 685 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 REP15Q6BDI9 236 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 OR4F3Q6IEY1 312 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 NIPAL1Q6NVV3 410 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 CYB5D1Q6P9G0 228 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 RINLQ6ZS11 566 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 GLRX5Q86SX6 157 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 SLCO6A1Q86UG4 719 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 TICAM1Q8IUC6 712 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 TMEM126BQ8IUX1 230 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 CA13Q8N1Q1 262 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 ARHGEF39Q8N4T4 335 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 OR5T3Q8NGG3 340 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.53■□□□□ 0.24
RNF4-209ENST00000507784 TSPEARQ8WU66 669 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 UCN3Q969E3 161 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 TESCQ96BS2 214 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 OR52E6Q96RD3 313 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 CTRCQ99895 268 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 RTKNQ9BST9 563 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 DUSP26Q9BV47 211 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 NPLQ9BXD5 320 aaPredicted RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 WDR41Q9HAD4 459 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 EFCAB1Q9HAE3 211 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.53■□□□□ 0.24
RNF4-209ENST00000507784 TOR4AQ9NXH8 423 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 SIDT1Q9NXL6 827 aaKnown RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 HCN3Q9P1Z3 774 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 DHCR7Q9UBM7 475 aaKnown RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 ATP6V1HQ9UI12 483 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 LEF1Q9UJU2 399 aaPredicted RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 EXO1Q9UQ84 846 aaKnown RBP16.53■□□□□ 0.24
RNF4-209ENST00000507784 ATG4BQ9Y4P1 393 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 CROCCQ5TZA2 2017 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 SCN2AQ99250 2005 aa16.53■□□□□ 0.24
RNF4-209ENST00000507784 SPTBP11277 2137 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 COL27A1Q8IZC6 1860 aaPredicted RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 A0A1W2PP18 115 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 DYTNA2CJ06 578 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 BBIP1A8MTZ0 92 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 H3BMH7 237 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 FBP2O00757 339 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 MRASO14807 208 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 PROM1O43490 865 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 CHST10O43529 356 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 CSO75390 466 aaKnown RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 PRKRAO75569 313 aaKnown RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 UNC5CO95185 931 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 NSA2O95478 260 aaKnown RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 PGRP06401 933 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 LAMP1P11279 417 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 PIM1P11309 404 aaPredicted RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 CCL4P13236 92 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 DRD2P14416 443 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 DDX5P17844 614 aaKnown RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 TLX1P31314 330 aaPredicted RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 BUD31P41223 144 aaPredicted RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 KIR3DL1P43629 444 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 C21orf58P58505 322 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 ACTN3Q08043 901 aaPredicted RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 RCAN2Q14206 197 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 ISXQ2M1V0 245 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 SPRED3Q2MJR0 410 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 DPY19L1Q2PZI1 675 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 NDUFAF5Q5TEU4 345 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 C1orf189Q5VU69 101 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 YOD1Q5VVQ6 348 aaPredicted RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 CDCP2Q5VXM1 449 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 SLC2A7Q6PXP3 512 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 PPP1R3BQ86XI6 285 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 NETO1Q8TDF5 533 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 EXOSC8Q96B26 276 aaKnown RBP16.52■□□□□ 0.24
RNF4-209ENST00000507784 MTERF3Q96E29 417 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 DEPDC7Q96QD5 511 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 CMKLR1Q99788 373 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 IL1RL2Q9HB29 575 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 LYRM4Q9HD34 91 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 APMAPQ9HDC9 416 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 ATAD3AQ9NVI7 634 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 DAPP1Q9UN19 280 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 CDC14AQ9UNH5 594 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 PCDHA9Q9Y5H5 950 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 MAU2Q9Y6X3 613 aa16.52■□□□□ 0.24
RNF4-209ENST00000507784 VPS13AQ96RL7 3174 aa16.52■□□□□ 0.23
RNF4-209ENST00000507784 C1orf226A1L170 272 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 GLOD5A6NK44 160 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 DSCR3O14972 297 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 POLR1CO15160 346 aaPredicted RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 GFRA3O60609 400 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 HNRNPCL1O60812 293 aaKnown RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 SCRG1O75711 98 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 CPSF4O95639 269 aaKnown RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 AIFM1O95831 613 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 FTH1P19P0C7X4 201 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 NR2F6P10588 404 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 CDK4P11802 303 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 DDCP20711 480 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms