RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OVCA2Q8WZ82 227 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 DIRAS2Q96HU8 199 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 LYSMD1Q96S90 227 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 POLR2J2Q9GZM3 115 aaKnown RBP16.99■□□□□ 0.31
NUP54-205ENST00000507257 NMNAT1Q9HAN9 279 aaPredicted RBP16.99■□□□□ 0.31
NUP54-205ENST00000507257 TXNL4BQ9NX01 149 aaKnown RBP16.99■□□□□ 0.31
NUP54-205ENST00000507257 ING3Q9NXR8 418 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 B3GNT2Q9NY97 397 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 PCDHGB7Q9Y5F8 929 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 SLC38A8A6NNN8 435 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 STK25O00506 426 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CDRT1O95170 752 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 VNN2O95498 520 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 GASTP01350 101 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 KLKB1P03952 638 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 OPN1SWP03999 348 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 MSL3P1P0C860 447 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CD22P20273 847 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 HLA-FP30511 346 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 GPC1P35052 558 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CRATP43155 626 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 MAP2K3P46734 347 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 ESCO2Q56NI9 601 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 DGKKQ5KSL6 1271 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 SLC25A30Q5SVS4 291 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 GRHL2Q6ISB3 625 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 MZT2BQ6NZ67 158 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 TRIM40Q6P9F5 258 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 LYPD8Q6UX82 237 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 OR5H6Q8NGV6 325 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 DEDD2Q8WXF8 326 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CRISPLD1Q9H336 500 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 ANKRA2Q9H9E1 313 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 ISYNA1Q9NPH2 558 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 REV1Q9UBZ9 1251 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CLEC2DQ9UHP7 191 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 PHF11Q9UIL8 331 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 GPSM3Q9Y4H4 160 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 B8ZZF3 427 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CLDN7O95471 211 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 TSPAN19P0C672 248 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 OR56A5P0C7T3 313 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 CCNYL3P0C7X3 344 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 FAM157BP0CG42 384 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 GAAP10253 952 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 ETFAP13804 333 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 HNF1BP35680 557 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 PPP3R1P63098 170 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 ZXDBP98169 803 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 TATDN3Q17R31 274 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 IDO2Q6ZQW0 420 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 OR8J1Q8NGP2 316 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 UBASH3BQ8TF42 649 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 SEPT5Q99719 369 aaPredicted RBP16.98■□□□□ 0.31
NUP54-205ENST00000507257 MGAT4BQ9UQ53 548 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 OR51B4Q9Y5P0 310 aa16.98■□□□□ 0.31
NUP54-205ENST00000507257 J3KTA2 159 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 SLC43A1O75387 559 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 STC2O76061 302 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 ANXA4P09525 319 aaPredicted RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 DDX5P17844 614 aaKnown RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 CORO1AP31146 461 aaKnown RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 CLDN20P56880 219 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 DAB2P98082 770 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 CDK6Q00534 326 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 ZNF91Q05481 1191 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 COX20Q5RI15 118 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 ATXN7L2Q5T6C5 722 aaPredicted RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 DPY19L3Q6ZPD9 716 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 USP50Q70EL3 339 aaPredicted RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 PLA2G15Q8NCC3 412 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 HJURPQ8NCD3 748 aaPredicted RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 NFKBIDQ8NI38 313 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 UCK2Q9BZX2 261 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 KCNN3Q9UGI6 736 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 STOML2Q9UJZ1 356 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 DIMT1Q9UNQ2 313 aaKnown RBP16.97■□□□□ 0.31
NUP54-205ENST00000507257 SNX11Q9Y5W9 270 aa16.97■□□□□ 0.31
NUP54-205ENST00000507257 PRAMEF33A0A0G2JMD5 474 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 TEX51A0A1B0GUA7 166 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 MYADML2A6NDP7 307 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 CACNB4O00305 520 aaPredicted RBP16.96■□□□□ 0.31
NUP54-205ENST00000507257 PRAMEF10O60809 474 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 OR2B3O76000 313 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 IFNW1P05000 195 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 ARAFP10398 606 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 CKMT1AP12532 417 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 POU2F1P14859 743 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 THPOP40225 353 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 OR1G1P47890 313 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 B4GALNT1Q00973 533 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 BCL2L1Q07817 233 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 HNRNPA0Q13151 305 aaKnown RBP16.96■□□□□ 0.31
NUP54-205ENST00000507257 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 TRIM48Q8IWZ4 208 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 RNF175Q8N4F7 328 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 AP2M1Q96CW1 435 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 KCTD7Q96MP8 289 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms