RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DLL4Q9NR61 685 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 HOMER3Q9NSC5 361 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 INTS10Q9NVR2 710 aaKnown RBP5.35□□□□□ -1.55
GYPB-208ENST00000507009 TRMT1Q9NXH9 659 aaKnown RBP5.35□□□□□ -1.55
GYPB-208ENST00000507009 TRMT6Q9UJA5 497 aaKnown RBP5.35□□□□□ -1.55
GYPB-208ENST00000507009 GDF2Q9UK05 429 aaPredicted RBP5.35□□□□□ -1.55
GYPB-208ENST00000507009 CBLCQ9ULV8 474 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 SOX13Q9UN79 622 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 PDE10AQ9Y233 779 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 YARS2Q9Y2Z4 477 aaKnown RBP5.35□□□□□ -1.55
GYPB-208ENST00000507009 REXO2Q9Y3B8 237 aaKnown RBP5.35□□□□□ -1.55
GYPB-208ENST00000507009 FAM215AQ9Y5M1 114 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 SLC22A7Q9Y694 548 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 COMMD10Q9Y6G5 202 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 ABCA2Q9BZC7 2435 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 ABCA4P78363 2273 aa5.35□□□□□ -1.55
GYPB-208ENST00000507009 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 TRGV5A0A0B4J1U4 118 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TRBC2A0A5B9 178 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CTAGE15A4D2H0 777 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 EEF1E1-BLOC1S5C9J1V9 151 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 GOLGA8MH3BSY2 632 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 GFYI3L273 518 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 AP3B1O00203 1094 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 EEF1E1O43324 174 aaKnown RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 ZFAND5O76080 213 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 LRATO95237 230 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 GUCA1CO95843 209 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 P04436 131 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 HIST1H2AGP0C0S8 130 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 BMP4P12644 408 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 ENO3P13929 434 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 FOSL1P15407 271 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TNNI3P19429 210 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 HIST1H2ADP20671 130 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CNR1P21554 472 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 PIGAP37287 484 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 SKIV2L2P42285 1042 aaKnown RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 SLC1A2P43004 574 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 KCNJ1P48048 391 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 RGS4P49798 205 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 PGGT1BP53609 377 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CCZ1BP86790 482 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CCZ1P86791 482 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 CSHL1Q14406 222 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 PCBP2Q15366 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
GYPB-208ENST00000507009 SLC25A35Q3KQZ1 300 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 FLYWCH1Q4VC44 716 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 OXLD1Q5BKU9 147 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 KIAA0930Q6ICG6 404 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 LCTLQ6UWM7 567 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CYHR1Q6ZMK1 362 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TRILQ7L0X0 811 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 PCGF5Q86SE9 256 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TMPRSS11BQ86T26 416 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CTAGE6Q86UF2 777 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 SLC13A5Q86YT5 568 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 SYCE1Q8N0S2 351 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CA13Q8N1Q1 262 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 MYO1HQ8N1T3 1032 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 FAM109AQ8N4B1 249 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 AFAP1L2Q8N4X5 818 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 APCDD1LQ8NCL9 501 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 UTP15Q8TED0 518 aaKnown RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 LINGO1Q96FE5 620 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 LRRC46Q96FV0 321 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 VMP1Q96GC9 406 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 SNF8Q96H20 258 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 FAR2Q96K12 515 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 HIST1H2AHQ96KK5 128 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CALR3Q96L12 384 aaKnown RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 JSRP1Q96MG2 331 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 RUNDC3BQ96NL0 473 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 RASL10BQ96S79 203 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 HIST1H2AJQ99878 128 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 FAM173AQ9BQD7 235 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 YIPF4Q9BSR8 244 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 DESI2Q9BSY9 194 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 HAUS8Q9BT25 410 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 H2AFJQ9BTM1 129 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 KIFC1Q9BW19 673 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TSGA10Q9BZW7 698 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 PCBD2Q9H0N5 130 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 SLC6A15Q9H2J7 730 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 SPNS1Q9H2V7 528 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TRIM45Q9H8W5 580 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 EIF2B3Q9NR50 452 aaKnown RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 PRTFDC1Q9NRG1 225 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 C20orf96Q9NUD7 363 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 ARL15Q9NXU5 204 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 ZNF223Q9UK11 482 aaPredicted RBP5.34□□□□□ -1.55
GYPB-208ENST00000507009 DHRS7Q9Y394 339 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 MAD1L1Q9Y6D9 718 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 CAPN6Q9Y6Q1 641 aa5.34□□□□□ -1.55
GYPB-208ENST00000507009 ARHGAP21Q5T5U3 1957 aa5.33□□□□□ -1.56
GYPB-208ENST00000507009 NCKAP5O14513 1909 aa5.33□□□□□ -1.56
GYPB-208ENST00000507009 IGKV3D-11A0A0A0MRZ8 115 aa5.33□□□□□ -1.56
GYPB-208ENST00000507009 OR14I1A6ND48 311 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms