RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 RMND5BQ96G75 393 aaPredicted RBP8.45□□□□□ -1.06
DHFR-202ENST00000504396 GPR21Q99679 349 aa8.45□□□□□ -1.06
DHFR-202ENST00000504396 FOXC2Q99958 501 aa8.45□□□□□ -1.06
DHFR-202ENST00000504396 SARGQ9BW04 601 aa8.45□□□□□ -1.06
DHFR-202ENST00000504396 KCMF1Q9P0J7 381 aa8.45□□□□□ -1.06
DHFR-202ENST00000504396 DHRS7Q9Y394 339 aa8.45□□□□□ -1.06
DHFR-202ENST00000504396 PHF3Q92576 2039 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 MAGEB16A2A368 324 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 LCMT2O60294 686 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 GALR3O60755 368 aaPredicted RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 ITGA10O75578 1167 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 TUBB4AP04350 444 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 ALOX12P18054 663 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 DNASE1P24855 282 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 VPS41P49754 854 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 CCR8P51685 355 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 CLCN2P51788 898 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 PPIAP62937 165 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 SP140Q13342 867 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 CTBP1Q13363 440 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 SNTB1Q13884 538 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 FBXW10Q5XX13 1052 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 AGTRAPQ6RW13 159 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 LCTLQ6UWM7 567 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 QSOX2Q6ZRP7 698 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 MDGA2Q7Z553 956 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 WDR53Q7Z5U6 358 aaPredicted RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 DENND6AQ8IWF6 608 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 NINJ1Q92982 152 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 SMC6Q96SB8 1091 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 BAG1Q99933 345 aaPredicted RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 CCDC77Q9BR77 488 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 GPATCH1Q9BRR8 931 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 DESI2Q9BSY9 194 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 BHLHE41Q9C0J9 482 aaPredicted RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 CLEC4MQ9H2X3 399 aaPredicted RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 GSX1Q9H4S2 264 aaPredicted RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 PNO1Q9NRX1 252 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 PNPLA3Q9NST1 481 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 ST6GALNAC2Q9UJ37 374 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 TRMT6Q9UJA5 497 aaKnown RBP8.44□□□□□ -1.06
DHFR-202ENST00000504396 ADAMTS6Q9UKP5 1117 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 PLEKHA6Q9Y2H5 1048 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
DHFR-202ENST00000504396 INTS1Q8N201 2190 aaKnown RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 SYNDIG1LA6NDD5 238 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 TMEM200CA6NKL6 621 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 A8MVJ9 347 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 G3V3Y1 287 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 KIF2AO00139 706 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 KLK8O60259 260 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 DNAJB6O75190 326 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 AVILO75366 819 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 C8GP07360 202 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HIST1H2AGP0C0S8 130 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 MLNP12872 115 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 RNH1P13489 461 aaKnown RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 HIST1H2ADP20671 130 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 ACVR2AP27037 513 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 SLC1A2P43004 574 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 ZFP36L2P47974 494 aaKnown RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 RGS4P49798 205 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 SSR4P51571 173 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 RAB8AP61006 207 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 PWP1Q13610 501 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 TERF2Q15554 542 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 TRIP13Q15645 432 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 XP32Q5T750 250 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HECTD2Q5U5R9 776 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 UGT3A1Q6NUS8 523 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 CYHR1Q6ZMK1 362 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 ZNF771Q7L3S4 317 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 STRA8Q7Z7C7 330 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 MYO1HQ8N1T3 1032 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 AFAP1L2Q8N4X5 818 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 ZFP62Q8NB50 900 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 PSD4Q8NDX1 1056 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 B3GNT7Q8NFL0 401 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 GOT1L1Q8NHS2 421 aaPredicted RBP8.43□□□□□ -1.06
DHFR-202ENST00000504396 C16orf52Q8NHV5 167 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 KIF18AQ8NI77 898 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 CD200R1Q8TD46 325 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 CALML6Q8TD86 181 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 CREB3L4Q8TEY5 395 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 ASB15Q8WXK1 588 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 PYCR2Q96C36 320 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HIST1H2AHQ96KK5 128 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HIST1H2AJQ99878 128 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HAUS8Q9BT25 410 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 H2AFJQ9BTM1 129 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 TSPYL1Q9H0U9 437 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 LIME1Q9H400 295 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 EXO5Q9H790 373 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 HPF1Q9NWY4 346 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 ALKBH4Q9NXW9 302 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 EDARQ9UNE0 448 aa8.43□□□□□ -1.06
DHFR-202ENST00000504396 TCRBV7S3A2A0A539 114 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms