RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 OR2A25A4D2G3 310 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 A6NNC1 897 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 NOTOA8MTQ0 251 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ARHGEF33A8MVX0 844 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 H7BY64 318 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 HAT1O14929 419 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 TTI1O43156 1089 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PRPF4O43172 522 aaKnown RBP eCLIP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 FOXS1O43638 330 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ASNA1O43681 348 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 LIASO43766 372 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 DNAJA2O60884 412 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CDC123O75794 336 aaPredicted RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 UBOX5O94941 541 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 VAPBO95292 243 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 TSPAN12O95859 305 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 IFNA2P01563 188 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 APRTP07741 180 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 C8orf89P0DMQ9 161 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 BMP7P18075 431 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 IL1RNP18510 177 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 HOXA5P20719 270 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PSMA3P25788 255 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 MGAT1P26572 445 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 FDFT1P37268 417 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SLC26A3P40879 764 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CCNFP41002 786 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 AVPR1BP47901 424 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 TRPC1P48995 793 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 TTPAP49638 278 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 DCAF7P61962 342 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 BASP1P80723 227 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ALDH6A1Q02252 535 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 OC90Q02509 493 aaPredicted RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ACVR1Q04771 509 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 KLF1Q13351 362 aaPredicted RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CUL1Q13616 776 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 KCNJ11Q14654 390 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PCBP2Q15366 365 aaKnown RBP eCLIP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PRTGQ2VWP7 1150 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 KLHL38Q2WGJ6 581 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ANKRD20A4Q4UJ75 823 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ACSBG2Q5FVE4 666 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 AARS2Q5JTZ9 985 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PCID2Q5JVF3 399 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SEL1L2Q5TEA6 688 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 HIST2H2BDQ6DRA6 164 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SPINK14Q6IE38 97 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 GALNTL5Q7Z4T8 443 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PAQR7Q86WK9 346 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CRLF3Q8IUI8 442 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SIAH3Q8IW03 269 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ZC3H7AQ8IWR0 971 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CLYBLQ8N0X4 340 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 BEST3Q8N1M1 668 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 AMER3Q8N944 861 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 LRRC57Q8N9N7 239 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 OR9A1PQ8NGU1 263 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 MAGEC3Q8TD91 643 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 METTL21AQ8WXB1 218 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SMPDL3AQ92484 453 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 RERGQ96A58 199 aaPredicted RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SIGLEC10Q96LC7 697 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CCDC138Q96M89 665 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PRAP1Q96NZ9 151 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PKP4Q99569 1192 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ARPC5LQ9BPX5 153 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 TUBB6Q9BUF5 446 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PLA2G12AQ9BZM1 189 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 ZNF700Q9H0M5 742 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 PLEKHF2Q9H8W4 249 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 MKKSQ9NPJ1 570 aaPredicted RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 C14orf105Q9NVL8 296 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 CHCHD3Q9NX63 227 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SYBUQ9NX95 663 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SIRT5Q9NXA8 310 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 UTP6Q9NYH9 597 aaKnown RBP5.18□□□□□ -1.58
SPTA1-209ENST00000498708 SPATA7Q9P0W8 599 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
SPTA1-209ENST00000498708 TENM1Q9UKZ4 2725 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 IGLV3-12A0A075B6K2 115 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 IGKV1-8A0A0C4DH67 115 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 FEZF1A0PJY2 475 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 ZNF860A6NHJ4 632 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 ERI2A8K979 691 aaKnown RBP5.17□□□□□ -1.58
SPTA1-209ENST00000498708 A8MUA0 341 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 MIF4GDA9UHW6 222 aaKnown RBP5.17□□□□□ -1.58
SPTA1-209ENST00000498708 E5RI56 91 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 SGK494L7N484 410 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 KPNA5O15131 536 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 ARHGEF9O43307 516 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 ZNF189O75820 626 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-209ENST00000498708 SUN1O94901 812 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 FKBP9O95302 570 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 CATP04040 527 aaKnown RBP5.17□□□□□ -1.58
SPTA1-209ENST00000498708 FDXRP22570 491 aa5.17□□□□□ -1.58
SPTA1-209ENST00000498708 EEF1DP29692 281 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms