RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CTDSPLO15194 276 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 RIPK2O43353 540 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NME2P1O60361 137 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NDUFS7O75251 213 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 RFPL2O75678 378 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 KRT33AO76009 404 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 DIRAS3O95661 229 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 PTBP3O95758 552 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CBSLP0DN79 551 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 HAPLN1P10915 354 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CD99P14209 185 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 LBPP18428 481 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CYP2A7P20853 494 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 DGKAP23743 735 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 HTR2AP28223 471 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 PBLDP30039 288 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SERPINB6P35237 376 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CBSP35520 551 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAGEA11P43364 429 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NPBWR1P48145 328 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CLCNKAP51800 687 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAPK12P53778 367 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SSTP61278 116 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 PPP2R2BQ00005 443 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SPIBQ01892 262 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 AKAP17AQ02040 695 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 FOLH1Q04609 750 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC34A1Q06495 639 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 KLRC3Q07444 240 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ABRQ12979 859 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 UBE2V1Q13404 147 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ESPL1Q14674 2120 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAPK6Q16659 721 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZSWIM7Q19AV6 140 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 EIF2S3LQ2VIR3 472 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CTU2Q2VPK5 515 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF284Q2VY69 593 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 AMZ1Q400G9 498 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TCTE1Q5JU00 501 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 BEND3Q5T5X7 828 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 LYSMD4Q5XG99 296 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SUMO4Q6EEV6 95 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 IRGCQ6NXR0 463 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 DUS1LQ6P1R4 473 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 AFTPHQ6ULP2 937 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 PARM1Q6UWI2 310 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM159AQ6UWV7 190 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MARK2Q7KZI7 788 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TECPR1Q7Z6L1 1165 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TAF8Q7Z7C8 310 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ASPGQ86U10 573 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 AQP12AQ8IXF9 295 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 RBMXL3Q8N7X1 1067 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM99Q8N816 258 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM98AQ8NCA5 519 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR52K2Q8NGK3 314 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 VANGL1Q8TAA9 524 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ACER1Q8TDN7 264 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 UBLCP1Q8WVY7 318 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 FIG4Q92562 907 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 EME1Q96AY2 570 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 AP2M1Q96CW1 435 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 BSCL2Q96G97 398 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 LURAP1Q96LR2 239 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SGK494Q96LW2 274 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF560Q96MR9 790 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF582Q96NG8 517 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SIGLEC11Q96RL6 698 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 LGMNQ99538 433 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 DDX50Q9BQ39 737 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SH2D3AQ9BRG2 576 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 LZTS2Q9BRK4 669 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TCHPQ9BT92 498 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 EFHD1Q9BUP0 239 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NUSAP1Q9BXS6 441 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MRPL13Q9BYD1 178 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 VN1R1Q9GZP7 353 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM234AQ9H0X4 552 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NAPBQ9H115 298 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 FOXP1Q9H334 677 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NCOR1P1Q9H4R4 102 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 GPN1Q9HCN4 374 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NGBQ9NPG2 151 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 PPANQ9NQ55 473 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CNGB3Q9NQW8 809 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 HEBP1Q9NRV9 189 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CENPMQ9NSP4 180 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM30AQ9NV96 361 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM51Q9NW97 253 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NPAP1Q9NZP6 1156 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 C1RLQ9NZP8 487 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 RCOR1Q9UKL0 485 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 NDRG2Q9UN36 371 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 KCNJ14Q9UNX9 436 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MRPS7Q9Y2R9 242 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 MRPS2Q9Y399 296 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 SRPRBQ9Y5M8 271 aaKnown RBP2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 CKAP5Q14008 2032 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 KIAA1671Q9BY89 1806 aa2.28□□□□□ -2.04
CKS1BP2-201ENST00000497342 C2orf16Q68DN1 1984 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms