RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 FER1L6-AS2Q96M78 137 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 RANBP9Q96S59 729 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 TMX4Q9H1E5 349 aaPredicted RBP2.34□□□□□ -2.03
VPS26A-208ENST00000497022 NKIRAS2Q9NYR9 191 aa2.34□□□□□ -2.03
VPS26A-208ENST00000497022 A0A087WV48 116 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 A0A0B4J203 849 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 FAM220BPB1ANY3 271 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 FAM86B1E9PN63 330 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 E2F3O00716 465 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 P2RX6O15547 441 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 FRAT2O75474 233 aaPredicted RBP2.33□□□□□ -2.04
VPS26A-208ENST00000497022 PIGRP01833 764 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 FAM86B2P0C5J1 330 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 PDGFRAP16234 1089 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 SLC1A6P48664 564 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 RAD23AP54725 363 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 NAGLUP54802 743 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 NAAAQ02083 359 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF79Q15937 498 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 PCK2Q16822 640 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 RFTN2Q52LD8 501 aaPredicted RBP2.33□□□□□ -2.04
VPS26A-208ENST00000497022 PLPP4Q5VZY2 271 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 TXNRD3NBQ6F5E7 133 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 NEPROQ6NW34 567 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 PHLDB2Q86SQ0 1253 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 MEX3DQ86XN8 651 aaKnown RBP2.33□□□□□ -2.04
VPS26A-208ENST00000497022 CARNMT1Q8N4J0 409 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 KIF18AQ8NI77 898 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 FLVCR1-AS1Q8TAF5 88 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 ST6GALNAC6Q969X2 333 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 SLC35C1Q96A29 364 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 PRMT1Q99873 361 aaKnown RBP2.33□□□□□ -2.04
VPS26A-208ENST00000497022 CENPOQ9BU64 300 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 TRIM7Q9C029 511 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 LIME1Q9H400 295 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 LMAN1LQ9HAT1 526 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 NMUR1Q9HB89 426 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 SH3GLB2Q9NR46 395 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 ARMCX1Q9P291 453 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 Q9UF83 564 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 NOCTQ9UK39 431 aaKnown RBP2.33□□□□□ -2.04
VPS26A-208ENST00000497022 HBS1LQ9Y450 684 aaKnown RBP2.33□□□□□ -2.04
VPS26A-208ENST00000497022 FAM205AQ6ZU69 1335 aa2.33□□□□□ -2.04
VPS26A-208ENST00000497022 TRAV9-2A0A087WT02 112 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 TSPY2A6NKD2 308 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 FOXI3A8MTJ6 420 aaPredicted RBP2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ACSL4O60488 711 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 KRT6AP02538 564 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 KRT6BP04259 564 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ATP6V1B1P15313 513 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ADRA2CP18825 462 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 PTAFRP25105 342 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 SRD5A2P31213 254 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 KRT6CP48668 564 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 RPP38P78345 283 aaKnown RBP2.32□□□□□ -2.04
VPS26A-208ENST00000497022 CETN1Q12798 172 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ABRQ12979 859 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 TTC31Q49AM3 519 aaPredicted RBP2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ARMCX4Q5H9R4 360 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 TMEM64Q6YI46 380 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF600Q6ZNG1 722 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 TMEM182Q6ZP80 229 aaPredicted RBP2.32□□□□□ -2.04
VPS26A-208ENST00000497022 VASH2Q86V25 355 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 TDHQ8IZJ6 230 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ELMOD1Q8N336 334 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 TMEM99Q8N816 258 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF781Q8N8C0 355 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 LSMEM1Q8N8F7 131 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 OR13C5Q8NGS8 318 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 C8orf46Q8TAG6 207 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 BPIFA2Q96DR5 249 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 PDFQ9HBH1 243 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 UBE2TQ9NPD8 197 aaPredicted RBP2.32□□□□□ -2.04
VPS26A-208ENST00000497022 PDRG1Q9NUG6 133 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 SH3GLB1Q9Y371 365 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 FBXO7Q9Y3I1 522 aa2.32□□□□□ -2.04
VPS26A-208ENST00000497022 C2orf92A0A1B0GVN3 265 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF724A8MTY0 619 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 H0Y9J4 135 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 CDX4O14627 284 aaPredicted RBP2.31□□□□□ -2.04
VPS26A-208ENST00000497022 SCO2O43819 266 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 GBAP04062 536 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 TIA1P31483 386 aaKnown RBP eCLIP2.31□□□□□ -2.04
VPS26A-208ENST00000497022 BRCC3P46736 316 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 OR3A1P47881 315 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 IST1P53990 364 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 ADARP55265 1226 aaKnown RBP2.31□□□□□ -2.04
VPS26A-208ENST00000497022 CEACAM7Q14002 265 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 RALBP1Q15311 655 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 CDO1Q16878 200 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 SHEQ5VZ18 495 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 FAM91A1Q658Y4 838 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 REP15Q6BDI9 236 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 SPATA21Q7Z572 469 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 NAXDQ8IW45 347 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 TIGD4Q8IY51 512 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 PRR22Q8IZ63 422 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 RIT1Q92963 219 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 PHYHIPLQ96FC7 376 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 CCM2Q9BSQ5 444 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms