RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 OR2T29Q8NH02 315 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ZFP90Q8TF47 636 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ZFPM2Q8WW38 1151 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 LCN9Q8WX39 176 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 OR5P2Q8WZ92 322 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MOAP1Q96BY2 351 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 C11orf24Q96F05 449 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 NRBF2Q96F24 287 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 AURKBQ96GD4 344 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 KCNC2Q96PR1 638 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ZNF347Q96SE7 839 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MYOCQ99972 504 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MKRN2Q9H000 416 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 EPB41L1Q9H4G0 881 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 RUBCNLQ9H714 662 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 REEP1Q9H902 201 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 TM9SF3Q9HD45 589 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SEMA3GQ9NS98 782 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 LYARQ9NX58 379 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 USE1Q9NZ43 259 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 OR6C2Q9NZP2 312 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SLC23A2Q9UGH3 650 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 HCN2Q9UL51 889 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ICKQ9UPZ9 632 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MRPS17Q9Y2R5 130 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 ZNF451Q9Y4E5 1061 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 HS3ST3A1Q9Y663 406 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SPACA6W5XKT8 324 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 F5P12259 2224 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 A0A1W2PQF6 199 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 C1orf226A1L170 272 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 TTLL8A6PVC2 850 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 VGLL3A8MV65 326 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 MYO1GB0I1T2 1018 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 C2CD4DB7Z1M9 353 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PRAMEF26H0Y7S4 382 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 H7BY64 318 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PDLIM1O00151 329 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PLPP1O14494 284 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 KIF1CO43896 1103 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 HS6ST1O60243 411 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 UGT2B11O75310 529 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ZNF217O75362 1048 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PRSS23O95084 383 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 C6orf47O95873 294 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 VIPP01282 170 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SLC35G6P0C7Q6 338 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 FPR1P21462 350 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 DNAJA1P31689 397 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 CCR5P51681 352 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 DGKEP52429 567 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ITGA1P56199 1179 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 WNT3P56703 355 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 DSTNP60981 165 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PPP2CBP62714 309 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PPP2CAP67775 309 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PHC1P78364 1004 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 CSNK1G2P78368 415 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SCARB2Q14108 478 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 FGL2Q14314 439 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 KIR2DS3Q14952 304 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SF1Q15637 639 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 RPE65Q16518 533 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 IFI44LQ53G44 452 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 OR4C11Q6IEV9 310 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 OR52E8Q6IFG1 317 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ALKBH2Q6NS38 261 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ANKRD26P1Q6NSI1 321 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 IYDQ6PHW0 289 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ENPP6Q6UWR7 440 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 CYP4Z1Q86W10 505 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 AMIGO1Q86WK6 493 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 EPHX4Q8IUS5 362 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 RBM12BQ8IXT5 1001 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 SAMD14Q8IZD0 417 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 ZNF786Q8N393 782 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SYNPOQ8N3V7 929 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 C2orf73Q8N5S3 287 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 METTL25Q8N6Q8 603 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ARL10Q8N8L6 244 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 OR4K1Q8NGD4 311 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 HMGB4Q8WW32 186 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 MAGED4Q96JG8 741 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 HSH2DQ96JZ2 352 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SLC35G5Q96KT7 338 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 MRGPRX1Q96LB2 322 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PRAP1Q96NZ9 151 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 RPP25Q9BUL9 199 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 PHF7Q9BWX1 381 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 GRIP2Q9C0E4 1043 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SRMSQ9H3Y6 488 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 TMEM38AQ9H6F2 299 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 FZD3Q9NPG1 666 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms