RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 RGS11O94810 467 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CCNB2O95067 398 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 F7P08709 466 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ACAA1P09110 424 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 GIPP09681 153 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 RBMS1P29558 406 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HNF1BP35680 557 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 AFF1P51825 1210 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 NR0B1P51843 470 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 NUDT6P53370 316 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CLDN8P56748 225 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 VLDLRP98155 873 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 LGALS3BPQ08380 585 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 GRM7Q14831 915 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 GSG1Q2KHT4 349 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 BSPRYQ5W0U4 402 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 C12orf73Q69YU5 71 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 MZT2AQ6P582 158 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 TSEN54Q7Z6J9 526 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SLC34A3Q8N130 599 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 PYROXD2Q8N2H3 581 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SYNPOQ8N3V7 929 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 C12orf29Q8N999 325 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CLHC1Q8NHS4 586 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CEP76Q8TAP6 659 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 UBA3Q8TBC4 463 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ZFPM2Q8WW38 1151 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SELENOMQ8WWX9 145 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 KCNJ9Q92806 393 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 UBE2FQ969M7 185 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 OTULINQ96BN8 352 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 KCTD7Q96MP8 289 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 NECTIN4Q96NY8 510 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CCM2Q9BSQ5 444 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SEMA4CQ9C0C4 833 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 BARX1Q9HBU1 254 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CYSLTR2Q9NS75 346 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DPP7Q9UHL4 492 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 FNDC3AQ9Y2H6 1198 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 A0A1B0GTL3 188 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 A0A1B0GW55 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 IRGMA1A4Y4 181 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 OR2M5A3KFT3 312 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 C9JVG2 144 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 BLOC1S5-TXNDC5H3BN57 136 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CTDSPLO15194 276 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 GSTZ1O43708 216 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HYAL3O43820 417 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HIST1H2AGP0C0S8 130 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4L4P0CJ87 422 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 BPIP17213 487 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ERCC2P18074 760 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ATF3P18847 181 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HIST1H2ADP20671 130 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DNASE1P24855 282 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 GDI2P50395 445 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 STARD6P59095 220 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 KCNJ10P78508 379 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CAP1Q01518 475 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SP2Q02086 613 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ECH1Q13011 328 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 MAPKAPK3Q16644 382 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 PPP1R26Q5T8A7 1209 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HIST2H2AA3Q6FI13 130 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SLC25A25Q6KCM7 469 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CNIH2Q6PI25 160 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ZC3H14Q6PJT7 736 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 BEND4Q6ZU67 534 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 BTN2A1Q7KYR7 527 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 TMPRSS9Q7Z410 1059 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 NPWQ8N729 165 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ARIH2OSQ8N7S6 290 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF485Q8NCK3 441 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 OR5M9Q8NGP3 310 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 OR9Q1Q8NGQ5 310 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 UBTD2Q8WUN7 234 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 SFT2D1Q8WV19 159 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 GTF3AQ92664 365 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 NSUN5Q96P11 429 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 AARSD1Q9BTE6 412 aaKnown RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 NKX6-2Q9C056 277 aaPredicted RBP4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 ARGFXA6NJG6 315 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 GFYI3L273 518 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PDCD5O14737 125 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TO15178 435 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PAGE1O75459 146 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 HTR3BO95264 441 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 LPLP06858 475 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 AZGP1P25311 298 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 GABRA5P31644 462 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 KDELR2P33947 212 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CAP2P40123 477 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms