RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 SKP1P63208 163 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 ASPHQ12797 758 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 LY6DQ14210 128 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 NSDHLQ15738 373 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 TMEM35AQ53FP2 167 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 AGBL2Q5U5Z8 902 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 RAB43Q86YS6 212 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 OR4N5Q8IXE1 308 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 MMP21Q8N119 569 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 C1orf52Q8N6N3 182 aaKnown RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 APIPQ96GX9 242 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 MAGEB10Q96LZ2 347 aaPredicted RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 PTCHD1Q96NR3 888 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 SH3GL2Q99962 352 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 TBCDQ9BTW9 1192 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 ING2Q9H160 280 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 VIPAS39Q9H9C1 493 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 LANCL2Q9NS86 450 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 C14orf105Q9NVL8 296 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 NKIRAS1Q9NYS0 192 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 ADGRE2Q9UHX3 823 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 ZDHHC2Q9UIJ5 367 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 FBXL4Q9UKA2 621 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 DAPP1Q9UN19 280 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 CACNA1GO43497 2377 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 AZIN1O14977 448 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 SEC24DO94855 1032 aaPredicted RBP10.47□□□□□ -0.73
APTX-230ENST00000494649 HSPA4LO95757 839 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 ENO1P06733 434 aaKnown RBP10.47□□□□□ -0.73
APTX-230ENST00000494649 CELA2AP08217 269 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 LINC00032P0C843 101 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 C8orf89P0DMQ9 161 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 PPP2R1BP30154 601 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 SLC13A2Q13183 592 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 CUL3Q13618 768 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 IMPG1Q17R60 797 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 FAM180BQ6P0A1 224 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 BORAQ6PGQ7 559 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 CYP20A1Q6UW02 462 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 COMMD6Q7Z4G1 85 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 DDIASQ8IXT1 998 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 SRFBP1Q8NEF9 429 aaKnown RBP10.47□□□□□ -0.73
APTX-230ENST00000494649 OR11G2Q8NGC1 345 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 DOK4Q8TEW6 326 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 SERPINI1Q99574 410 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 SLC29A3Q9BZD2 475 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 TGIF2Q9GZN2 237 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 ZNF160Q9HCG1 818 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 NECTIN3Q9NQS3 549 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 GIMAP2Q9UG22 337 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 ATG4BQ9Y4P1 393 aa10.47□□□□□ -0.73
APTX-230ENST00000494649 ATP6AP2A0A1C7CYW4 349 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 PEX12O00623 359 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 NPHS1O60500 1241 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 PRMT3O60678 531 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 ATP6AP2O75787 350 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 UROSP10746 265 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 ACPPP15309 386 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 NR1D1P20393 614 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 CPN2P22792 545 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 ST13P50502 369 aaKnown RBP10.46□□□□□ -0.73
APTX-230ENST00000494649 RAB38P57729 211 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 RHAGQ02094 409 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 GALNT1Q10472 559 aaPredicted RBP10.46□□□□□ -0.73
APTX-230ENST00000494649 TBL3Q12788 808 aaKnown RBP10.46□□□□□ -0.73
APTX-230ENST00000494649 LINC00303Q3SY05 128 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 COLEC12Q5KU26 742 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 CCNYL2Q5T2Q4 361 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 NUDT13Q86X67 352 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 ZNF781Q8N8C0 355 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 CDC26Q8NHZ8 85 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 METTL21AQ8WXB1 218 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 TUBB1Q9H4B7 451 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 SEMA3GQ9NS98 782 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 TEX10Q9NXF1 929 aaPredicted RBP10.46□□□□□ -0.73
APTX-230ENST00000494649 KCMF1Q9P0J7 381 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 C5AR2Q9P296 337 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 VPS29Q9UBQ0 182 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 STK38LQ9Y2H1 464 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 TSC22D4Q9Y3Q8 395 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 DNAJC15Q9Y5T4 150 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 MED13Q9UHV7 2174 aa10.46□□□□□ -0.73
APTX-230ENST00000494649 CHD6Q8TD26 2715 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 A0A0A6YYD5 115 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 TGFBR3LH3BV60 316 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 CYR61O00622 381 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 SERPINE1P05121 402 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 JUNP05412 331 aaKnown RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 CD63P08962 238 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 JAK1P23458 1154 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 TPP2P29144 1249 aaPredicted RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 SLC1A6P48664 564 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 POLE2P56282 527 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 ABCE1P61221 599 aaKnown RBP10.46□□□□□ -0.74
APTX-230ENST00000494649 BST1Q10588 318 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 DCAF10Q5QP82 559 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 KANK2Q63ZY3 851 aa10.46□□□□□ -0.74
APTX-230ENST00000494649 OR2T11Q8NH01 316 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms