RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 SCAMP5Q8TAC9 235 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 POF1BQ8WVV4 589 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 TM9SF4Q92544 642 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 CREB3L1Q96BA8 519 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 MYO19Q96H55 970 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 SEMA3CQ99985 751 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 NUDT4Q9NZJ9 180 aa9.71□□□□□ -0.85
LINC00488-201ENST00000494582 A0A1B0GVM2 712 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 SHISA3A0PJX4 238 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ZAR1LA6NP61 321 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 LOC730098B7Z3J9 87 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 FPGTO14772 594 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 SIGLEC5O15389 551 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 FGF10O15520 208 aaPredicted RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 IRAK2O43187 625 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ULK1O75385 1050 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 MMP10P09238 476 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 SDC1P18827 310 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 SLC6A1P30531 599 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 NUP62P37198 522 aaPredicted RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 WNT3P56703 355 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ERVFC1P60507 584 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 RPL6Q02878 288 aaKnown RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 SIGLEC14Q08ET2 396 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 CAMK2DQ13557 499 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ZNF57Q68EA5 555 aaPredicted RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ZNF621Q6ZSS3 439 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 KANSL1Q7Z3B3 1105 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 RASGRP3Q8IV61 690 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 LRRC17Q8N6Y2 441 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 HSD17B8Q92506 261 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 POP5Q969H6 163 aaKnown RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ZBED3Q96IU2 234 aaPredicted RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 RADILQ96JH8 1075 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 PRR14Q9BWN1 585 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 GSX2Q9BZM3 304 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 SLC6A17Q9H1V8 727 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 RANBP3Q9H6Z4 567 aaPredicted RBP9.71□□□□□ -0.86
LINC00488-201ENST00000494582 EMC7Q9NPA0 242 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 FZD3Q9NPG1 666 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 CLN6Q9NWW5 311 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 ASIC5Q9NY37 505 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 PADI2Q9Y2J8 665 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 CSNK1G3Q9Y6M4 447 aa9.71□□□□□ -0.86
LINC00488-201ENST00000494582 DNAH12Q6ZR08 3092 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 TTC3P53804 2025 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 TCRBV16S1A1N1A0A5B0 115 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SH3D21A4FU49 640 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 RFXAPO00287 272 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SLC28A1O00337 649 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PRRG1O14668 218 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 FFAR2O15552 330 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SUV39H1O43463 412 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SCN2BO60939 215 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PIPP12273 146 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 BPIP17213 487 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 POU3F2P20265 443 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ITGALP20701 1170 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 EVX1P49640 407 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 MAD2L1Q13257 205 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ALFQ53S48 1182 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ERICH5Q6P6B1 374 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 MBOAT1Q6ZNC8 495 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ASB18Q6ZVZ8 466 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 RNF175Q8N4F7 328 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ARRDC4Q8NCT1 418 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 AGBL3Q8NEM8 1001 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SCMH1Q96GD3 660 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 HHIPQ96QV1 700 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SLC29A3Q9BZD2 475 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SPATA6Q9NWH7 488 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PCDHGA9Q9Y5G4 932 aaKnown RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 LOC105369274A0A096LPK9 316 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ARPC4-TTLL3A0A0A6YYG9 625 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PRR23AA6NEV1 266 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 GABRR3A8MPY1 467 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ADAMDEC1O15204 470 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 RGS11O94810 467 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 CPSF4O95639 269 aaKnown RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PDYNP01213 254 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 GASTP01350 101 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ZNF286BP0CG31 522 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ANXA8P13928 327 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 CDC42P60953 191 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 MLLT11Q13015 90 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 INSL4Q14641 139 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 DCAF4L1Q3SXM0 396 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 NBPF12Q5TAG4 269 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 MFSD14CQ5VZR4 134 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SLC27A1Q6PCB7 646 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 BHLHB9Q6PI77 547 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 CEACAM20Q6UY09 585 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 B3GLCTQ6Y288 498 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 MOB2Q70IA6 237 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 OR4N4Q8N0Y3 316 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SRFBP1Q8NEF9 429 aaKnown RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PIH1D2Q8WWB5 315 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms