RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TNPO3Q9Y5L0 923 aaKnown RBP31.08■■■□□ 2.57
CBX4-203ENST00000494546 EXOC1LA0A1B0GW35 172 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 GABRR3A8MPY1 467 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 CYR61O00622 381 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 MYO1DO94832 1006 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 RASAL1O95294 804 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 RBP1P09455 135 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 ZNF766Q5HY98 468 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 ZNF793Q6ZN11 406 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 GOLGA7Q7Z5G4 137 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 RPS19BP1Q86WX3 136 aaKnown RBP31.07■■■□□ 2.56
CBX4-203ENST00000494546 PTGR2Q8N8N7 351 aaPredicted RBP31.07■■■□□ 2.56
CBX4-203ENST00000494546 PSMG3-AS1Q96PY0 264 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 SLX1AQ9BQ83 275 aa31.07■■■□□ 2.56
CBX4-203ENST00000494546 LRRK2Q5S007 2527 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 TGFBR3LH3BV60 316 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 ATP5A1P25705 553 aaKnown RBP31.06■■■□□ 2.56
CBX4-203ENST00000494546 PPP2R1BP30154 601 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 CD96P40200 585 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 OC90Q02509 493 aaPredicted RBP31.06■■■□□ 2.56
CBX4-203ENST00000494546 AP5B1Q2VPB7 878 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 KHDRBS2Q5VWX1 349 aaKnown RBP31.06■■■□□ 2.56
CBX4-203ENST00000494546 LIPJQ5W064 366 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 ACOT4Q8N9L9 421 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 HUS1BQ8NHY5 278 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 PHF21BQ96EK2 531 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 SIGLEC12Q96PQ1 595 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 MAPKAP1Q9BPZ7 522 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 IPPKQ9H8X2 491 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 XPR1Q9UBH6 696 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 ADGRE2Q9UHX3 823 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 CLDN16Q9Y5I7 305 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 PTPN13Q12923 2485 aa31.06■■■□□ 2.56
CBX4-203ENST00000494546 SSR2P43308 183 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 PIK3CGP48736 1102 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 OR1C1Q15619 314 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 TSNAXIP1Q2TAA8 658 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 LGI4Q8N135 537 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 B3GNT7Q8NFL0 401 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 MTERF1Q99551 399 aaKnown RBP31.05■■■□□ 2.56
CBX4-203ENST00000494546 LYRM4Q9HD34 91 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 KCMF1Q9P0J7 381 aa31.05■■■□□ 2.56
CBX4-203ENST00000494546 ERRFI1Q9UJM3 462 aaPredicted RBP31.05■■■□□ 2.56
CBX4-203ENST00000494546 HIST1H1TP22492 207 aaPredicted RBP31.04■■■□□ 2.56
CBX4-203ENST00000494546 EEF1DP29692 281 aaKnown RBP31.04■■■□□ 2.56
CBX4-203ENST00000494546 ARL1P40616 181 aaPredicted RBP31.04■■■□□ 2.56
CBX4-203ENST00000494546 RAP1GDS1P52306 607 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 SRSF11Q05519 484 aaKnown RBP31.04■■■□□ 2.56
CBX4-203ENST00000494546 SPINK14Q6IE38 97 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 MDS2Q8NDY4 140 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 SORBS1Q9BX66 1292 aaKnown RBP31.04■■■□□ 2.56
CBX4-203ENST00000494546 DEFB126Q9BYW3 111 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 DMRT3Q9NQL9 472 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 KLHL1Q9NR64 748 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 PCDHGA11Q9Y5H2 935 aa31.04■■■□□ 2.56
CBX4-203ENST00000494546 USP9XQ93008 2570 aaPredicted RBP31.03■■■□□ 2.56
CBX4-203ENST00000494546 TRBV11-1A0A0K0K1C0 115 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 MYOCOSA0A1B0GUC4 107 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 ABHD2P08910 425 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 SNRPAP09012 282 aaKnown RBP31.03■■■□□ 2.56
CBX4-203ENST00000494546 RNF224P0DH78 156 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 COL6A2P12110 1019 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 PIK3CBP42338 1070 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 TERF2Q15554 542 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 CPSF6Q16630 551 aaKnown RBP eCLIP31.03■■■□□ 2.56
CBX4-203ENST00000494546 DEPDC1Q5TB30 811 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 ZNF324BQ6AW86 544 aaPredicted RBP31.03■■■□□ 2.56
CBX4-203ENST00000494546 TRMT10CQ7L0Y3 403 aaKnown RBP31.03■■■□□ 2.56
CBX4-203ENST00000494546 NR4A3Q92570 626 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 ATP6V1E2Q96A05 226 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 REPS1Q96D71 796 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 CENPKQ9BS16 269 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 TMCO1Q9UM00 188 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 SLC5A6Q9Y289 635 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 RNF11Q9Y3C5 154 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 SPACA6W5XKT8 324 aa31.03■■■□□ 2.56
CBX4-203ENST00000494546 UGDHO60701 494 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 CTNSO60931 367 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 SMIM24O75264 130 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 CRYABP02511 175 aaKnown RBP31.02■■■□□ 2.56
CBX4-203ENST00000494546 IFNA16P05015 189 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 TPP2P29144 1249 aaPredicted RBP31.02■■■□□ 2.56
CBX4-203ENST00000494546 CLCN2P51788 898 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 PHEXP78562 749 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 PMP22Q01453 160 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 LGSNQ5TDP6 509 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 METTL2BQ6P1Q9 378 aaKnown RBP31.02■■■□□ 2.56
CBX4-203ENST00000494546 APCDD1LQ8NCL9 501 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 HES7Q9BYE0 225 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 NOL11Q9H8H0 719 aaKnown RBP31.02■■■□□ 2.56
CBX4-203ENST00000494546 ADAP2Q9NPF8 381 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 FBXW2Q9UKT8 454 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 OSGIN2Q9Y236 505 aa31.02■■■□□ 2.56
CBX4-203ENST00000494546 H0YIV9 168 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 RIPK2O43353 540 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 SCELO95171 688 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 FAM153BP0C7A2 387 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 CD46P15529 392 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 MLF1P58340 268 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 RPS13P62277 151 aaKnown RBP31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms