RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 NDRG4Q9ULP0 352 aaKnown RBP12.29□□□□□ -0.44
PRAME-213ENST00000492657 GPR34Q9UPC5 381 aa12.29□□□□□ -0.44
PRAME-213ENST00000492657 PCDHGA10Q9Y5H3 936 aa12.29□□□□□ -0.44
PRAME-213ENST00000492657 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 A0A1W2PRB8 838 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 ZNF99A8MXY4 864 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 C5orf67F2Z3F1 127 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 PI15O43692 258 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 CCDC159P0C7I6 412 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 HOXB6P17509 224 aaKnown RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 PPIBP23284 216 aaKnown RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 GPM6BQ13491 265 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 GCNT6Q5T4J0 391 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 PIP5KL1Q5T9C9 394 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 PNCKQ6P2M8 343 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 FAHD1Q6P587 224 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 PSRC1Q6PGN9 363 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 PDZD3Q86UT5 571 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 FAM129CQ86XR2 697 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 PLD3Q8IV08 490 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 ADGRF3Q8IZF5 1079 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 ANKRD53Q8N9V6 530 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 GOT1L1Q8NHS2 421 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 RAD51AP1Q96B01 352 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SH3YL1Q96HL8 342 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 ZNF514Q96K75 400 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 MYNNQ9NPC7 610 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 MBNL1Q9NR56 388 aaKnown RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 TAAR2Q9P1P5 351 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 ENPP5Q9UJA9 477 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 OR1A2Q9Y585 309 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SNX8Q9Y5X2 465 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SPTBN5Q9NRC6 3674 aaKnown RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 SCAMP1O15126 338 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 MID1O15344 667 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 VEGFDO43915 354 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 PCDH8O95206 1070 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 STATHP02808 62 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 MT-ND2P03891 347 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 MASP1P48740 699 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SEPHS1P49903 392 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 TAS2R38P59533 333 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 NPRL3Q12980 569 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 MAD2L1BPQ15013 274 aaPredicted RBP12.28□□□□□ -0.44
PRAME-213ENST00000492657 OXA1LQ15070 435 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 CTF1Q16619 201 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SLCO6A1Q86UG4 719 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 C7orf61Q8IZ16 206 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 OR52N2Q8NGI0 321 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 CAPSLQ8WWF8 208 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 UCN3Q969E3 161 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 CHFRQ96EP1 664 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 COX14Q96I36 57 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 FEVQ99581 238 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 ATAD3AQ9NVI7 634 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SERGEFQ9UGK8 458 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 CORO2BQ9UQ03 480 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 NAALAD2Q9Y3Q0 740 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
PRAME-213ENST00000492657 MUC22E2RYF6 1773 aaPredicted RBP12.27□□□□□ -0.44
PRAME-213ENST00000492657 A0A0G2JN53 185 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 H7BY64 318 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 PCDHGA12O60330 932 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 ITIH1P19827 911 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 DRD3P35462 400 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 PCYT1AP49585 367 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 RPS3AP61247 264 aaKnown RBP12.27□□□□□ -0.44
PRAME-213ENST00000492657 KCNC4Q03721 635 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 KEAP1Q14145 624 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 SLC9B2Q86UD5 537 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 FAM20CQ8IXL6 584 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 SLC5A8Q8N695 610 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 SETD9Q8NE22 299 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 RORBQ92753 470 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 CXorf40BQ96DE9 158 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 PRAP1Q96NZ9 151 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 PLA2G2FQ9BZM2 168 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 CXorf36Q9H7Y0 433 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 PALMDQ9NP74 551 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 SLAMF7Q9NQ25 335 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 TAS2R9Q9NYW1 312 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 LYVE1Q9Y5Y7 322 aa12.27□□□□□ -0.44
PRAME-213ENST00000492657 SNRNP200O75643 2136 aaKnown RBP12.27□□□□□ -0.45
PRAME-213ENST00000492657 KNL1Q8NG31 2342 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 PRAMEF33A0A0G2JMD5 474 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 PRR23AA6NEV1 266 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 CLDN25C9JDP6 229 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 M0R3G1 203 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 TNFRSF11BO00300 401 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 PLPP1O14494 284 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 PRAMEF10O60809 474 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 WBP4O75554 376 aaKnown RBP12.27□□□□□ -0.45
PRAME-213ENST00000492657 RB1P06400 928 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 KELP23276 732 aa12.27□□□□□ -0.45
PRAME-213ENST00000492657 PTX3P26022 381 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms