RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	CROT	Q9UKG9	612 aa		12.83	□□□□□ -0.36
NUP188-208	ENST00000491502	AP3M1	Q9Y2T2	418 aa		12.83	□□□□□ -0.36
NUP188-208	ENST00000491502	AHCTF1	Q8WYP5	2266 aa		12.83	□□□□□ -0.36
NUP188-208	ENST00000491502	PTPRQ	Q9UMZ3	2332 aa		12.83	□□□□□ -0.36
NUP188-208	ENST00000491502	TEX51	A0A1B0GUA7	166 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	ANKRD65	E5RJM6	399 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	ANKRD28	O15084	1053 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	POLR1C	O15160	346 aa	Predicted RBP	12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	ZSCAN9	O15535	394 aa	Predicted RBP	12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	MAG	P20916	626 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	SKP1	P63208	163 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	CYP4F2	P78329	520 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	VAC14	Q08AM6	782 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	PTGR1	Q14914	329 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	ZIC1	Q15915	447 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	MAPKAPK3	Q16644	382 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	ANXA8L1	Q5VT79	327 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	NIPAL1	Q6NVV3	410 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	BNC2	Q6ZN30	1099 aa	Predicted RBP	12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	DTX1	Q86Y01	620 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	KMT5C	Q86Y97	462 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	DEFB107A	Q8IZN7	70 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	TMEM132C	Q8N3T6	1108 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	KIF2B	Q8N4N8	673 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	NT5C	Q8TCD5	201 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	SNRNP27	Q8WVK2	155 aa	Known RBP	12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	KLHL6	Q8WZ60	621 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	C11orf24	Q96F05	449 aa	Predicted RBP	12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	TCTN2	Q96GX1	697 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	TSSK3	Q96PN8	268 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	NRTN	Q99748	197 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	SH3GL1	Q99961	368 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	CADM1	Q9BY67	442 aa	Known RBP	12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	WDR41	Q9HAD4	459 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	SEMA5B	Q9P283	1151 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	DLGAP4	Q9Y2H0	992 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	B3GALT1	Q9Y5Z6	326 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	CFAP47	Q6ZTR5	3102 aa		12.82	□□□□□ -0.36
NUP188-208	ENST00000491502	ITPR1	Q14643	2758 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	LRIT2	A6NDA9	550 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502		K7ENP7	123 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	LCMT2	O60294	686 aa	Known RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	KCNH1	O95259	989 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	ETHE1	O95571	254 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	STAMBP	O95630	424 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	PGR	P06401	933 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	KLK1	P06870	262 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	COX7A2	P14406	83 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	ITGAX	P20702	1163 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	CPOX	P36551	454 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	KIR3DL1	P43629	444 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	SEPHS1	P49903	392 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	MAPK12	P53778	367 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	SLC25A3	Q00325	362 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	NFYC	Q13952	458 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	IL11RA	Q14626	422 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	HEPACAM	Q14CZ8	416 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	TRMT5	Q32P41	509 aa	Known RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	ADPRM	Q3LIE5	342 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	TIGD2	Q4W5G0	525 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	CPTP	Q5TA50	214 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	FAM219B	Q5XKK7	198 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	OR4C11	Q6IEV9	310 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	INO80C	Q6PI98	192 aa	Predicted RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	ABHD13	Q7L211	337 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	VN1R5	Q7Z5H4	357 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	GPR180	Q86V85	440 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	BPHL	Q86WA6	291 aa	Predicted RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	SCUBE1	Q8IWY4	988 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	RNF175	Q8N4F7	328 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	DPP10	Q8N608	796 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	OR2L5	Q8NG80	312 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	FLVCR1-AS1	Q8TAF5	88 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	CREB3L4	Q8TEY5	395 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	GAL3ST3	Q96A11	431 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	CRELD1	Q96HD1	420 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	ITCH	Q96J02	903 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	OR52E6	Q96RD3	313 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	F2RL3	Q96RI0	385 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	UBL7	Q96S82	380 aa	Predicted RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	NPAS2	Q99743	824 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	THTPA	Q9BU02	230 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	FAIM2	Q9BWQ8	316 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	CHRNA10	Q9GZZ6	450 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	MYNN	Q9NPC7	610 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	SPAG4	Q9NPE6	437 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	WDR70	Q9NW82	654 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	FAM120C	Q9NX05	1096 aa	Known RBP	12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	BAIAP2L1	Q9UHR4	511 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	LAMA5	O15230	3695 aa		12.81	□□□□□ -0.36
NUP188-208	ENST00000491502	TLCD2	A6NGC4	264 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SRPX2	O60687	465 aa	Predicted RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SH3BGRL	O75368	114 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	NELFE	P18615	380 aa	Known RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	CAPN3	P20807	821 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SSR2	P43308	183 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	ARL4D	P49703	201 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	PSME3	P61289	254 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	KCNJ2	P63252	427 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms