RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 OR2W6PQ8NHA6 318 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 MBD3L2Q8NHZ7 208 aaPredicted RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 RAD51AP1Q96B01 352 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 HSPBAP1Q96EW2 488 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 PIK3IP1Q96FE7 263 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 PGM2Q96G03 612 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 PIGQQ9BRB3 760 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 AARSD1Q9BTE6 412 aaKnown RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 ANGPTL4Q9BY76 406 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 OSBPL8Q9BZF1 889 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 ACKR4Q9NPB9 350 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 DDX56Q9NY93 547 aaKnown RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 ZNF223Q9UK11 482 aaPredicted RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 PPIEQ9UNP9 301 aaKnown RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 ERVK-11Q9UQG0 969 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
TRIM56-204ENST00000487252 R3HDM2Q9Y2K5 976 aaKnown RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 YARS2Q9Y2Z4 477 aaKnown RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.75□□□□□ -0.69
TRIM56-204ENST00000487252 KRT87PA6NCN2 255 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 CD8B2A6NJW9 211 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 G3V3Y1 287 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 SGK494L7N484 410 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 CRTAMO95727 393 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 GAS8O95995 478 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 THBS1P07996 1170 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 ERGP11308 486 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 ADRA1AP35348 466 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 CETN2P41208 172 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 GNGT1P63211 74 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 TAP2Q03519 686 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 TMEM214Q6NUQ4 689 aaKnown RBP10.74□□□□□ -0.69
TRIM56-204ENST00000487252 NPNTQ6UXI9 565 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 TRMT10CQ7L0Y3 403 aaKnown RBP10.74□□□□□ -0.69
TRIM56-204ENST00000487252 BBOF1Q8ND07 529 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 CFAP61Q8NHU2 1237 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 NEIL3Q8TAT5 605 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 MCOLN3Q8TDD5 553 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 RAPGEF5Q92565 580 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 SNF8Q96H20 258 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 WFIKKN1Q96NZ8 548 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 TSPYL1Q9H0U9 437 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
TRIM56-204ENST00000487252 MED12Q93074 2177 aa10.74□□□□□ -0.69
TRIM56-204ENST00000487252 A0A096LNT2 108 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 TRBV11-1A0A0K0K1C0 115 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 C3orf70A6NLC5 250 aaPredicted RBP10.73□□□□□ -0.69
TRIM56-204ENST00000487252 A8MVJ9 347 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 OVOL3O00110 214 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 GPRIN2O60269 458 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 OR6B1O95007 311 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 C1orf105O95561 183 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 IL1RNP18510 177 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 KDELR1P24390 212 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 MDH1P40925 334 aaKnown RBP10.73□□□□□ -0.69
TRIM56-204ENST00000487252 CLCN2P51788 898 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 GPR143P51810 404 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 CSE1LP55060 971 aaKnown RBP10.73□□□□□ -0.69
TRIM56-204ENST00000487252 DEFA6Q01524 100 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 HSPA14Q0VDF9 509 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 CALCOCO2Q13137 446 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 PPP1R7Q15435 360 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 XKR6Q5GH73 641 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 TNFAIP8L3Q5GJ75 292 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 LIPNQ5VXI9 398 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 TAS2R42Q7RTR8 314 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 VN1R4Q7Z5H5 301 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 SLC26A11Q86WA9 606 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 VSIG1Q86XK7 387 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 RELL1Q8IUW5 271 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 SLC22A8Q8TCC7 542 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 ASZ1Q8WWH4 475 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 ATG4AQ8WYN0 398 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 SCYL1Q96KG9 808 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 GORASP1Q9BQQ3 440 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 ACAT2Q9BWD1 397 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 FSD1LQ9BXM9 530 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 EXO5Q9H790 373 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 ZNF703Q9H7S9 590 aaPredicted RBP10.73□□□□□ -0.69
TRIM56-204ENST00000487252 MRPS30Q9NP92 439 aaKnown RBP10.73□□□□□ -0.69
TRIM56-204ENST00000487252 HPF1Q9NWY4 346 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 TUBA8Q9NY65 449 aaPredicted RBP10.73□□□□□ -0.69
TRIM56-204ENST00000487252 RYR3Q15413 4870 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 FREM3P0C091 2139 aa10.73□□□□□ -0.69
TRIM56-204ENST00000487252 hCG_1818297A0A087WSY0 165 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 IGKV3D-11A0A0A0MRZ8 115 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 TCRBV16S1A1N1A0A5B0 115 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 RIPK2O43353 540 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 LIASO43766 372 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 RDH16O75452 317 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 TJP3O95049 919 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 KRT1P04264 644 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 FHP07954 510 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 OR56A5P0C7T3 313 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 SRD5A1P18405 259 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 IDUAP35475 653 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 CDKN2BP42772 138 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 DNASE1L1P49184 302 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 PRDX1Q06830 199 aaKnown RBP10.72□□□□□ -0.69
TRIM56-204ENST00000487252 CRYZQ08257 329 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms