RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 UTP15Q8TED0 518 aaKnown RBP13.9□□□□□ -0.18
U2AF1-211ENST00000486519 KRT35Q92764 455 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 KLHL31Q9H511 634 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 LRRC40Q9H9A6 602 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 CATSPERZQ9NTU4 200 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 A0A1B0GTH6 734 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 SPOPO43791 374 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 CATP04040 527 aaKnown RBP13.89□□□□□ -0.19
U2AF1-211ENST00000486519 SERPIND1P05546 499 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 CDH1P12830 882 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 FMO4P31512 558 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 KCNJ2P63252 427 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 ZNF791Q3KP31 576 aaPredicted RBP13.89□□□□□ -0.19
U2AF1-211ENST00000486519 VASNQ6EMK4 673 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 CLNKQ7Z7G1 428 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 CDKL3Q8IVW4 592 aaPredicted RBP13.89□□□□□ -0.19
U2AF1-211ENST00000486519 REXO1L1PQ8IX06 675 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 INTS12Q96CB8 462 aaKnown RBP13.89□□□□□ -0.19
U2AF1-211ENST00000486519 SGCZQ96LD1 299 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 MALRD1Q5VYJ5 2156 aa13.89□□□□□ -0.19
U2AF1-211ENST00000486519 PKD1L1Q8TDX9 2849 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 A0A096LNT2 108 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 KPNA5O15131 536 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 CD3EAPO15446 510 aaKnown RBP13.88□□□□□ -0.19
U2AF1-211ENST00000486519 ADAM11O75078 769 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 NDUFS7O75251 213 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 ACSL3O95573 720 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 RNH1P13489 461 aaKnown RBP13.88□□□□□ -0.19
U2AF1-211ENST00000486519 RPS3P23396 243 aaKnown RBP eCLIP13.88□□□□□ -0.19
U2AF1-211ENST00000486519 GDF1P27539 372 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 ATP5DP30049 168 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 HSD17B2P37059 387 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 GDF10P55107 478 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 PRAMEP78395 509 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 PARP6Q2NL67 630 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 ASTE1Q2TB18 679 aaPredicted RBP13.88□□□□□ -0.19
U2AF1-211ENST00000486519 BHLHB9Q6PI77 547 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 HSDL2Q6YN16 418 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 MBOAT1Q6ZNC8 495 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
U2AF1-211ENST00000486519 GIMAP7Q8NHV1 300 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 BEX2Q9BXY8 128 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 UGT2B28Q9BY64 529 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 ADAM19Q9H013 955 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 FAM114A2Q9NRY5 505 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 DTX4Q9Y2E6 619 aa13.88□□□□□ -0.19
U2AF1-211ENST00000486519 MGAM2Q2M2H8 2515 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 ZNF839A8K0R7 811 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 PSTPIP1O43586 416 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 TNFSF13O75888 250 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 RNF4P78317 190 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 ASPHQ12797 758 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 CUL1Q13616 776 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 BMPR2Q13873 1038 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 SLC18A3Q16572 532 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 EIPR1Q53HC9 387 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 UBAP2Q5T6F2 1119 aaKnown RBP13.87□□□□□ -0.19
U2AF1-211ENST00000486519 SLC22A10Q63ZE4 541 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 AADACL2Q6P093 401 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 DNM1P46Q6ZS02 220 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 SYDE1Q6ZW31 735 aaPredicted RBP13.87□□□□□ -0.19
U2AF1-211ENST00000486519 KIAA1328Q86T90 577 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 KATNAL2Q8IYT4 538 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 OR8K1Q8NGG5 319 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 PAQR8Q8TEZ7 354 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 PTPMT1Q8WUK0 201 aaPredicted RBP13.87□□□□□ -0.19
U2AF1-211ENST00000486519 TUBA1CQ9BQE3 449 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 MED18Q9BUE0 208 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 SFXN3Q9BWM7 321 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 ANGPTL4Q9BY76 406 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 CALHM2Q9HA72 323 aa13.87□□□□□ -0.19
U2AF1-211ENST00000486519 CCDC177Q9NQR7 707 aaPredicted RBP13.87□□□□□ -0.19
U2AF1-211ENST00000486519 BOKQ9UMX3 212 aaPredicted RBP13.87□□□□□ -0.19
U2AF1-211ENST00000486519 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 PSMD12O00232 456 aaPredicted RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 OR1F1O43749 312 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 NRDCO43847 1150 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 STK10O94804 968 aaKnown RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 SMIM10L1P0DMW3 83 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 SKIV2L2P42285 1042 aaKnown RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 SLC1A1P43005 524 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 TTPAP49638 278 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 ZBED6P86452 979 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 RUNX2Q13950 521 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 NR1I3Q14994 352 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 P3H1Q32P28 736 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 PDLIM3Q53GG5 364 aaPredicted RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 BICRALQ6AI39 1079 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 OPN5Q6U736 354 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 FAM71DQ8N9W8 422 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 OR10G3Q8NGC4 313 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 ALKBH8Q96BT7 664 aaKnown RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 NTNG2Q96CW9 530 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 C1orf159Q96HA4 380 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms