RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PMP22Q01453 160 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 TSTA3Q13630 321 aaPredicted RBP5.8□□□□□ -1.48
UBR3-210ENST00000484596 TRIM29Q14134 588 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 SGSM1Q2NKQ1 1148 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 GPR33Q49SQ1 333 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 ADAM5Q6NVV9 412 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 FBXL22Q6P050 247 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 SLC25A47Q6Q0C1 308 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 NLRP14Q86W24 1093 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 LACC1Q8IV20 430 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 LAX1Q8IWV1 398 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 CCNYQ8ND76 341 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 OR52E1Q8NGJ3 308 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 ZNRF4Q8WWF5 429 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 DTD2Q96FN9 168 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 NACAP1Q9BZK3 213 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 ZCCHC3Q9NUD5 404 aaKnown RBP5.8□□□□□ -1.48
UBR3-210ENST00000484596 EPHA6Q9UF33 1036 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 IL36AQ9UHA7 158 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 UBQLN2Q9UHD9 624 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 TSPAN16Q9UKR8 245 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 FOXA2Q9Y261 457 aaPredicted RBP5.8□□□□□ -1.48
UBR3-210ENST00000484596 CCNB3Q8WWL7 1395 aa5.8□□□□□ -1.48
UBR3-210ENST00000484596 SETD1AO15047 1707 aaKnown RBP5.79□□□□□ -1.48
UBR3-210ENST00000484596 EP400Q96L91 3159 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 SLIT1O75093 1534 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 LRRC9Q6ZRR7 1453 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 TLR4O00206 839 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 TEX28O15482 410 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 ACSL4O60488 711 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 ATP1B1P05026 303 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 RNF224P0DH78 156 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 ETS1P14921 441 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 FERP16591 822 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 UGT1A6P19224 532 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 ELAVL4P26378 380 aaKnown RBP5.79□□□□□ -1.48
UBR3-210ENST00000484596 SFNP31947 248 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 GPC3P51654 580 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 SP3Q02447 781 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 GAMTQ14353 236 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 ZNF74Q16587 644 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 NEK5Q6P3R8 708 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 PRUNE1Q86TP1 453 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 PRSS35Q8N3Z0 413 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 WDSUB1Q8N9V3 476 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 ZNF248Q8NDW4 579 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 APOBEC4Q8WW27 367 aaKnown RBP5.79□□□□□ -1.48
UBR3-210ENST00000484596 GGHQ92820 318 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 RFT1Q96AA3 541 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 PRMT1Q99873 361 aaKnown RBP5.79□□□□□ -1.48
UBR3-210ENST00000484596 ALKBH7Q9BT30 221 aaPredicted RBP5.79□□□□□ -1.48
UBR3-210ENST00000484596 MAN2C1Q9NTJ4 1040 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.79□□□□□ -1.48
UBR3-210ENST00000484596 SPASTQ9UBP0 616 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 SLC12A6Q9UHW9 1150 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 PRDM4Q9UKN5 801 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 PPP2R2CQ9Y2T4 447 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 MTUS2Q5JR59 1369 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 MAP3K1Q13233 1512 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 LRRC7Q96NW7 1537 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 GCC2Q8IWJ2 1684 aa5.79□□□□□ -1.48
UBR3-210ENST00000484596 NLRP1Q9C000 1473 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 ARHGAP23Q9P227 1491 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 PTPN23Q9H3S7 1636 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 TMEM129A0AVI4 362 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 E5RGE8 158 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 NR5A2O00482 541 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 CXCL14O95715 111 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 GAS8O95995 478 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 AREGP15514 252 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 ZNF26P17031 533 aaPredicted RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 GOT1P17174 413 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 DUTP33316 252 aaKnown RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 CAMLGP49069 296 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 FKBP1BP68106 108 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 HTD2P86397 168 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 HNRNPDQ14103 355 aaKnown RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 NWD1Q149M9 1564 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 ZNF542PQ5EBM4 170 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 FIP1L1Q6UN15 594 aaKnown RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 B3GLCTQ6Y288 498 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 C1orf186Q6ZWK4 172 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 FCRLAQ7L513 359 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 ADCK1Q86TW2 530 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 HSCBQ8IWL3 235 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 TDHQ8IZJ6 230 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 THEM5Q8N1Q8 247 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 KDM8Q8N371 416 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 SAP25Q8TEE9 199 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 TMEM186Q96B77 213 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 RBM41Q96IZ5 413 aaKnown RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 C16orf45Q96MC5 204 aaPredicted RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 NYXQ9GZU5 481 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 FGF22Q9HCT0 170 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 RNF186Q9NXI6 227 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 TAS2R3Q9NYW6 316 aa5.78□□□□□ -1.48
UBR3-210ENST00000484596 ELF5Q9UKW6 265 aaPredicted RBP5.78□□□□□ -1.48
UBR3-210ENST00000484596 NSG2Q9Y328 171 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms