RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 QRFPRQ96P65 431 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 SERINC2Q96SA4 455 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 CCDC28BQ9BUN5 200 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 C1orf50Q9BV19 199 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 ROGDIQ9GZN7 287 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 GPN2Q9H9Y4 310 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 LRTM1Q9HBL6 345 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 ZNF282Q9UDV7 671 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 G3BP2Q9UN86 482 aaKnown RBP18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 MAP4K5Q9Y4K4 846 aa18.84■□□□□ 0.61
TRAPPC12-220ENST00000482645 DMXL2Q8TDJ6 3036 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 CHST10O43529 356 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 EEDO75530 441 aaKnown RBP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 KLK1P06870 262 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 BSGP35613 385 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 XCR1P46094 333 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 OCA2Q04671 838 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 TBL3Q12788 808 aaKnown RBP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 SRSF6Q13247 344 aaKnown RBP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 DNASE1L3Q13609 305 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 NCF4Q15080 339 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 TERF2Q15554 542 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 VWA2Q5GFL6 755 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 MFSD4BQ5TF39 518 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 TMEM198Q66K66 360 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 LARP4Q71RC2 724 aaKnown RBP eCLIP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 OVCH1Q7RTY7 1134 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 COMMD6Q7Z4G1 85 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 NUDT13Q86X67 352 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 FNDC5Q8NAU1 212 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 CEP70Q8NHQ1 597 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 ZCCHC14Q8WYQ9 949 aaKnown RBP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 APIPQ96GX9 242 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 ZNF717Q9BY31 904 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 C1orf109Q9NX04 203 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 HEY2Q9UBP5 337 aa18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 POLR3HQ9Y535 204 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC12-220ENST00000482645 ARHGAP10A1A4S6 786 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 SEC22BO75396 215 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 CDC123O75794 336 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 PRR35P0CG20 571 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 LBPP18428 481 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 F8A1P23610 371 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 RPS18P62269 152 aaKnown RBP18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 RPS15P62841 145 aaKnown RBP18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 GABPB1Q06547 395 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 ACSM2AQ08AH3 577 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 SLAMF1Q13291 335 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 RUNX2Q13950 521 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 ERV3-1Q14264 604 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 ACSM2BQ68CK6 577 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 CYP20A1Q6UW02 462 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 PAGE2Q7Z2X7 111 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 CA13Q8N1Q1 262 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 METTL4Q8N3J2 472 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 ANKS4BQ8N8V4 417 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 CATSPER2Q96P56 530 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 EBPLQ9BY08 206 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 SOX17Q9H6I2 414 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 FBXW2Q9UKT8 454 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 RAXQ9Y2V3 346 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 MRPS18BQ9Y676 258 aaKnown RBP18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 SCN2AQ99250 2005 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 CCDC88CQ9P219 2028 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 LAMA5O15230 3695 aa18.82■□□□□ 0.6
TRAPPC12-220ENST00000482645 PSMD12O00232 456 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 JRKO75564 520 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 LIFP15018 202 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 PRPH2P23942 346 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 TSFMP43897 325 aaKnown RBP18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 ERVK-8P63133 956 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 SPIN4Q56A73 249 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 C6orf136Q5SQH8 315 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 CCNYL2Q5T2Q4 361 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 EFCAB3Q8N7B9 438 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 FAM47BQ8NA70 645 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 STT3BQ8TCJ2 826 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 FKBP10Q96AY3 582 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 MKKSQ9NPJ1 570 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 TRIM33Q9UPN9 1127 aa18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 FARSAQ9Y285 508 aaKnown RBP18.81■□□□□ 0.6
TRAPPC12-220ENST00000482645 C21orf140B9A014 251 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 RRP8O43159 456 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 CNOT3O75175 753 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 CAPNS1P04632 268 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 ALDOCP09972 364 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 NCF2P19878 526 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 LIM2P55344 173 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 NKG7Q16617 165 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 MINDY4Q4G0A6 757 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 RFTN2Q52LD8 501 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 MRPL14Q6P1L8 145 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 TMEM151BQ8IW70 566 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 CHTF18Q8WVB6 975 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 MIEF2Q96C03 454 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 MAPKAP1Q9BPZ7 522 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 ACTL8Q9H568 366 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 DDX31Q9H8H2 851 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 IL17BQ9UHF5 180 aa18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 PADI2Q9Y2J8 665 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms