RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 MYO1DO94832 1006 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 LDLRP01130 860 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TGFB1P01137 390 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 RBP1P09455 135 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 CNTFP26441 200 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 ECHS1P30084 290 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 PIK3CGP48736 1102 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 CLCN2P51788 898 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TDGF1P3P51864 188 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 HNRNPFP52597 415 aaKnown RBP14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 MLF1P58340 268 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TECRLQ5HYJ1 363 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 METTL2BQ6P1Q9 378 aaKnown RBP14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TMEM178AQ8NBL3 297 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TMEM52Q8NDY8 209 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 PAFAH2Q99487 392 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 ANKRD10Q9NXR5 420 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 CPSF2Q9P2I0 782 aaKnown RBP14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 PLEKHB1Q9UF11 243 aaPredicted RBP14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TMCO1Q9UM00 188 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 TSC22D4Q9Y3Q8 395 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 SPACA6W5XKT8 324 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 LRRK2Q5S007 2527 aa14.35□□□□□ -0.11
EXOSC3-205ENST00000482614 A0A087WUV0 522 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 CYSRT1A8MQ03 144 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 POC1B-GALNT4F8VUJ3 575 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 FCHO1O14526 889 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 UGDHO60701 494 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 RNF224P0DH78 156 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 COL6A2P12110 1019 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 TPP2P29144 1249 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 EEF1DP29692 281 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 PIK3CBP42338 1070 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 MAGEA12P43365 314 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 PHEXP78562 749 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 GTF2H2Q13888 395 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 TSNAXIP1Q2TAA8 658 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 DEPDC1Q5TB30 811 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 KHDRBS2Q5VWX1 349 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 SPINK14Q6IE38 97 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 GTF2H2CQ6P1K8 395 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 GFRALQ6UXV0 394 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 UBE3DQ7Z6J8 389 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 PLD6Q8N2A8 252 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 ARMC10Q8N2F6 343 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 TMEM132CQ8N3T6 1108 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 ACOT4Q8N9L9 421 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 FAM98AQ8NCA5 519 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 APCDD1LQ8NCL9 501 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 C7orf57Q8NEG2 295 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 REPS1Q96D71 796 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 VMP1Q96GC9 406 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 SCMH1Q96GD3 660 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 CENPKQ9BS16 269 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 ACTR8Q9H981 624 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 ADAP2Q9NPF8 381 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 KLHL1Q9NR64 748 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 KCMF1Q9P0J7 381 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 LRFN1Q9P244 771 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 ZNF180Q9UJW8 692 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 PPIEQ9UNP9 301 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 CLDN16Q9Y5I7 305 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 USP9XQ93008 2570 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 SVILO95425 2214 aa14.34□□□□□ -0.11
EXOSC3-205ENST00000482614 POLEQ07864 2286 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 TRBV11-1A0A0K0K1C0 115 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 A0A1B0GUH1 482 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 TGFBR3LH3BV60 316 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 RTCAO00442 366 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 LRRTM2O43300 516 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 SH3BGRLO75368 114 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 SCELO95171 688 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 SP1P08047 785 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 STSP08842 583 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 HIST1H1TP22492 207 aaPredicted RBP14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 SSR2P43308 183 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 CYB561P49447 251 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 ST13P50502 369 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 PER3P56645 1201 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 STX4Q12846 297 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 DDX39BQ13838 428 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 ELAVL1Q15717 326 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 OR4C11Q6IEV9 310 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 SLC25A25Q6KCM7 469 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 ZNF793Q6ZN11 406 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 IFT20Q8IY31 132 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 HUS1BQ8NHY5 278 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 RGMAQ96B86 450 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 TRIM44Q96DX7 344 aaPredicted RBP14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 SCYL1Q96KG9 808 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 CSF3RQ99062 836 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 MAPKAP1Q9BPZ7 522 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 CCDC77Q9BR77 488 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 ALOXE3Q9BYJ1 711 aa14.33□□□□□ -0.12
EXOSC3-205ENST00000482614 OR51B5Q9H339 312 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms