RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TRIM64BA6NI03 449 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 SHISA7A6NL88 538 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 PSMD3O43242 534 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 TNFSF12O43508 249 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 IDH3BO43837 385 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 SNAP91O60641 907 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 EPOP01588 193 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 CHRNGP07510 517 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 DPEP1P16444 411 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 AOC1P19801 751 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 CCR4P51679 360 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 NDST2P52849 883 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 AP1B1Q10567 949 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 RAPH1Q70E73 1250 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 Q71RC1 249 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-210ENST00000482158 ZFAND4Q86XD8 727 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF444Q8N0Y2 327 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-210ENST00000482158 PKP2Q99959 881 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 NUDT4Q9NZJ9 180 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF319Q9P2F9 582 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 UBQLN2Q9UHD9 624 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 KCNK6Q9Y257 313 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 EXOC6BQ9Y2D4 811 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 OR1A2Q9Y585 309 aa4.73□□□□□ -1.65
SF3B1-210ENST00000482158 UMODL1Q5DID0 1318 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 B4GAT1O43505 415 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 DCXO43602 365 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 KERAO60938 352 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 MTRF1O75570 445 aaKnown RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 GAS8-AS1O95177 125 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 CPNE6O95741 557 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 PNPP00491 289 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 RNF224P0DH78 156 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 CPA3P15088 417 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ANPEPP15144 967 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 CYP3A5P20815 502 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 YBEYP58557 167 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ABCE1P61221 599 aaKnown RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 UBXN1Q04323 297 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 GABPAQ06546 454 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 LCP2Q13094 533 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 GIT2Q14161 759 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 EPC2Q52LR7 807 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 C2CD6Q53TS8 623 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 CAPN13Q6MZZ7 669 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 CD164L2Q6UWJ8 174 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF410Q86VK4 478 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 STHQ8IWL8 128 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 OR4N5Q8IXE1 308 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 SIDT2Q8NBJ9 832 aaKnown RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 PRCCQ92733 491 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF274Q96GC6 653 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ACAT2Q9BWD1 397 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 TRIM7Q9C029 511 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 APPL1Q9UKG1 709 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 SH3GLB1Q9Y371 365 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 ZHX2Q9Y6X8 837 aa4.72□□□□□ -1.65
SF3B1-210ENST00000482158 DHX29Q7Z478 1369 aaKnown RBP4.71□□□□□ -1.66
SF3B1-210ENST00000482158 TCP10L2B9ZVM9 353 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 DDX39AO00148 427 aaKnown RBP4.71□□□□□ -1.66
SF3B1-210ENST00000482158 TFECO14948 347 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-210ENST00000482158 GLRA1P23415 457 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 MLF2Q15773 248 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-210ENST00000482158 SNRNP48Q6IEG0 339 aaKnown RBP4.71□□□□□ -1.66
SF3B1-210ENST00000482158 TRIM65Q6PJ69 517 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 ELMOD1Q8N336 334 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 METTL4Q8N3J2 472 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 FBXW8Q8N3Y1 598 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 SSC4DQ8WTU2 575 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 UBTD2Q8WUN7 234 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 LIPHQ8WWY8 451 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 IWS1Q96ST2 819 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 PINK1Q9BXM7 581 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 S100A14Q9HCY8 104 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 COMMD8Q9NX08 183 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 PLEK2Q9NYT0 353 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 ERVK-19Q9WJR5 959 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 RNF215Q9Y6U7 377 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 CACNA1FO60840 1977 aa4.71□□□□□ -1.66
SF3B1-210ENST00000482158 PCNX3Q9H6A9 2034 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 IGHV4-30-2A0A087WSY4 118 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 CXCL14O95715 111 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 BAG2O95816 211 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 FHITP49789 147 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 ERVK-16P61578 105 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 KIAA0141Q14154 515 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-210ENST00000482158 MEF2DQ14814 521 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 STX1AQ16623 288 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 UPP1Q16831 310 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 TAF1BQ53T94 588 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-210ENST00000482158 TEX35Q5T0J7 233 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 NEPROQ6NW34 567 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 WDR49Q8IV35 697 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 MAPK1IP1LQ8NDC0 245 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 OR52B6Q8NGF0 335 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 SPATA3Q8NHX4 192 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 MGARPQ8TDB4 240 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 S1PR3Q99500 378 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 LGMNQ99538 433 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms