RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 MOXD2PA6NHM9 499 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PCDH17O14917 1159 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PRLP01236 227 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 PRPS1L1P21108 318 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 RGRP47804 291 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 ABATP80404 500 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 CYP4F8P98187 520 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 CYP27C1Q4G0S4 372 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 IFI44LQ53G44 452 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 CST9Q5W186 159 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 AQP11Q8NBQ7 271 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 FAM46DQ8NEK8 389 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 GPR137Q96N19 417 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 MARVELD1Q9BSK0 173 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 CINPQ9BW66 212 aaPredicted RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 LATS2Q9NRM7 1088 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 ENOPH1Q9UHY7 261 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 ISM1B1AKI9 464 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 J3KTA2 159 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PSIP1O75475 530 aaKnown RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 HBQ1P09105 142 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PTPN5P54829 565 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 SRSF11Q05519 484 aaKnown RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 ZNF57Q68EA5 555 aaPredicted RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 TYW3Q6IPR3 259 aaKnown RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 CNIH2Q6PI25 160 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PLEKHH3Q7Z736 793 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PDZD3Q86UT5 571 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 SPATA2LQ8IUW3 424 aaPredicted RBP12.87□□□□□ -0.35
DFFB-209ENST00000477548 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 CMTM7Q96FZ5 175 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 NELL2Q99435 816 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 P2RY12Q9H244 342 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 LIN7BQ9HAP6 207 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PCDHB11Q9Y5F2 797 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
DFFB-209ENST00000477548 BET1O15155 118 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 PLOD3O60568 738 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 RNGTTO60942 597 aaKnown RBP12.86□□□□□ -0.35
DFFB-209ENST00000477548 PRAMEF1O95521 474 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 CCT3P49368 545 aaKnown RBP12.86□□□□□ -0.35
DFFB-209ENST00000477548 CPT1AP50416 773 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 CRISP1P54107 249 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 MTAPQ13126 283 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 UGT8Q16880 541 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 NOXRED1Q6NXP6 359 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 PAQR6Q6TCH4 344 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 C11orf65Q8NCR3 313 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 KCTD7Q96MP8 289 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 TM9SF2Q99805 663 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 SPON2Q9BUD6 331 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 AUP1Q9Y679 476 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 SMIM35A0A1B0GVV1 85 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 ZAR1LA6NP61 321 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 DGKAP23743 735 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 CASP9P55211 416 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 CAV3P56539 151 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
DFFB-209ENST00000477548 MLLT11Q13015 90 aaPredicted RBP12.86□□□□□ -0.35
DFFB-209ENST00000477548 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
DFFB-209ENST00000477548 P2RY14Q15391 338 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 AANATQ16613 207 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 ZNF628Q5EBL2 1059 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 HDDC2Q7Z4H3 204 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 DDX53Q86TM3 631 aaKnown RBP12.86□□□□□ -0.35
DFFB-209ENST00000477548 LRRC17Q8N6Y2 441 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 ZNF222Q9UK12 451 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 PCDHB1Q9Y5F3 818 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 PCDHGB7Q9Y5F8 929 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 SNX11Q9Y5W9 270 aa12.86□□□□□ -0.35
DFFB-209ENST00000477548 IGLV3-10A0A075B6K4 115 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 A0A0D9SEW6 157 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TLR4O00206 839 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SLC9A3R1O14745 358 aaPredicted RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 INSIG1O15503 277 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 LZTS3O60299 673 aaPredicted RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 B3GAT3O94766 335 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 IGHA2P01877 340 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 FEN1P39748 380 aaKnown RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 WNT3P56703 355 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 HSD17B7P56937 341 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 PPP3R1P63098 170 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TOMM20Q15388 145 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 HKDC1Q2TB90 917 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SDHAF4Q5VUM1 108 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms