RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	NAXD	Q8IW45	347 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SKA3	Q8IX90	412 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	NLGN4X	Q8N0W4	816 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPD1L	Q8N335	351 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TBC1D19	Q8N5T2	526 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	DTX3	Q8N9I9	347 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNAAF3	Q8N9W5	541 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	DENND6B	Q8NEG7	585 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR8J3	Q8NGG0	315 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR9Q1	Q8NGQ5	310 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF606	Q8WXB4	792 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CLEC4D	Q8WXI8	215 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ADAMTS14	Q8WXS8	1223 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	EDA	Q92838	391 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SEMA4D	Q92854	862 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPRASP2	Q96D09	838 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	C19orf60	Q96EN9	201 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	EXOC2	Q96KP1	924 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	QRFPR	Q96P65	431 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MCEE	Q96PE7	176 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	FYTTD1	Q96QD9	318 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR2M2	Q96R28	347 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR5M11	Q96RB7	305 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MBOAT4	Q96T53	435 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SDHC	Q99643	169 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPR22	Q99680	433 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PITX2	Q99697	317 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MED18	Q9BUE0	208 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LGR4	Q9BXB1	951 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PORCN	Q9H237	461 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	RHOJ	Q9H4E5	214 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	C11orf49	Q9H6J7	331 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TASP1	Q9H6P5	420 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MINDY3	Q9H8M7	445 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PLAC1	Q9HBJ0	212 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MCCC2	Q9HCC0	563 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SMURF1	Q9HCE7	757 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ANKEF1	Q9NU02	776 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CMTM6	Q9NX76	183 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CNOT2	Q9NZN8	540 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZIM2	Q9NZV7	527 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC23A1	Q9UHI7	598 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SFMBT1	Q9UHJ3	866 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	USP18	Q9UMW8	372 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MGAT4B	Q9UQ53	548 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ENTPD4	Q9Y227	616 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAN2B2	Q9Y2E5	1009 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CMAHP	Q9Y471	501 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ASB1	Q9Y576	335 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CASP8AP2	Q9UKL3	1982 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PLXNB2	O15031	1838 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A0G2JPF8	293 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM240B	A0A1B0GVZ2	78 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	LOC390937	A0A1W2PQ73	354 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM149A	A5PLN7	773 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ANKDD1B	A6NHY2	528 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	LRRC72	A6NJI9	287 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	WASHC1	A8K0Z3	465 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520		A8MVJ9	347 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	HNRNPCL3	B7ZW38	293 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TEX46	H3BTG2	121 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MEIS2	O14770	477 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	NRP1	O14786	923 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SYN3	O14994	580 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MDM4	O15151	490 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	T	O15178	435 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CASC3	O15234	703 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	B4GAT1	O43505	415 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TPST1	O60507	370 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	STX11	O75558	287 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSMD10	O75832	226 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CCNB2	O95067	398 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	GLUD1	P00367	558 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CST1	P01037	141 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	C9	P02748	559 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MT-ND2	P03891	347 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CHRNG	P07510	517 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	HOXC6	P09630	235 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	HNRNPCL4	P0DMR1	293 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ODC1	P11926	461 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF250	P15622	560 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CBL	P22681	906 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPS3	P23396	243 aa	Known RBP eCLIP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	STOM	P27105	288 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	HOXA13	P31271	388 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CSF2RB	P32927	897 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SDC2	P34741	201 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MMP12	P39900	470 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TSPAN7	P41732	249 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	HSPA7	P48741	367 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TGM4	P49221	684 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACOT2	P49753	483 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RGS6	P49758	472 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAP2K6	P52564	334 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	AP1S1	P61966	158 aa		4.51	□□□□□ -1.69

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