RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 LOC102723996A0A087X1L8 192 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 TEX13DA0A0J9YY54 714 aaPredicted RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 PTGESO14684 152 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 TO15178 435 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 ARHGEF9O43307 516 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 HUS1O60921 280 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 TADA2AO75478 443 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 B3GAT3O94766 335 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 GJB5O95377 273 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 ASS1P00966 412 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 LIPFP07098 398 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 CCDC172P0C7W6 258 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 ODC1P11926 461 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 VPREB1P12018 145 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 EPHA2P29317 976 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 CA8P35219 290 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 EIF2DP41214 584 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 CSRP3P50461 194 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 MFAP3P55082 362 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 MYL6P60660 151 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 POLR2FP61218 127 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 SNRPEP62304 92 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 NOP14P78316 857 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 ELAVL2Q12926 359 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 SHHQ15465 462 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 ZBTB6Q15916 424 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 CBWD6Q4V339 395 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 FAM98BQ52LJ0 330 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 EPC2Q52LR7 807 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 CBWD3Q5JTY5 395 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 C1orf220Q5T0J3 134 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 GCNT6Q5T4J0 391 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 SPECC1LQ69YQ0 1117 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 BHLHB9Q6PI77 547 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 TRIM65Q6PJ69 517 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 DCLRE1AQ6PJP8 1040 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 SCARA5Q6ZMJ2 495 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 ENOSF1Q7L5Y1 443 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 APTXQ7Z2E3 356 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 LDB1Q86U70 411 aaPredicted RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 METTL23Q86XA0 190 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 PTOV1Q86YD1 416 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 VSTM4Q8IW00 320 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 MINDY1Q8N5J2 469 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 LRRC52Q8N7C0 313 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 L3MBTL4Q8NA19 623 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 SPC24Q8NBT2 197 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 APPL2Q8NEU8 664 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 OR2T6Q8NHC8 308 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 MOSPD2Q8NHP6 518 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 ZMAT2Q96NC0 199 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 ZNF558Q96NG5 402 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 CASD1Q96PB1 797 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 RAD9AQ99638 391 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 NUDT16L1Q9BRJ7 211 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 TMEM175Q9BSA9 504 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 PI4K2AQ9BTU6 479 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 SEMA6AQ9H2E6 1030 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 SNX25Q9H3E2 840 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 HHATLQ9HCP6 504 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 UBE2TQ9NPD8 197 aaPredicted RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 FAM207AQ9NSI2 230 aaPredicted RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 ZNHIT6Q9NWK9 470 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 MIOSQ9NXC5 875 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 DNAJC12Q9UKB3 198 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 PRG3Q9Y2Y8 225 aaPredicted RBP3.61□□□□□ -1.83
UBR3-209ENST00000477461 COQ4Q9Y3A0 265 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 PYGO1Q9Y3Y4 419 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 PTPRSQ13332 1948 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 MYH10P35580 1976 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 PTPRJQ12913 1337 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 KIAA1671Q9BY89 1806 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 GBF1Q92538 1859 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 MAGEB17A8MXT2 336 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 KPNA7A9QM74 516 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 H7C423 109 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 PIRO00625 290 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CYB561D2O14569 222 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 AP5Z1O43299 807 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SSX4O60224 188 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 PRAMEF11O60813 436 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 BEST1O76090 585 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 DDHD2O94830 711 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 UCHL3P15374 230 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 FERP16591 822 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CASP14P31944 242 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CTNNB1P35222 781 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 BRCC3P46736 316 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 LHX1P48742 406 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SLC11A1P49279 550 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 KLK7P49862 253 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 GSDMDP57764 484 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SNX16P57768 344 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 PPP2R2BQ00005 443 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 GCNT1Q02742 428 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CCDC173Q0VFZ6 552 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms