RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 HOXC8P31273 242 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 IRS1P35568 1242 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 PIGAP37287 484 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 HBA1P69905 142 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 CDK5R2Q13319 367 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ZNHIT3Q15649 155 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-204ENST00000477421 MINDY4Q4G0A6 757 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 DLEU7Q6UYE1 221 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 C6orf120Q7Z4R8 191 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 LAPTM4BQ86VI4 370 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 ZSWIM9Q86XI8 627 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 FAM217AQ8IXS0 508 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 LGALS12Q96DT0 336 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 COMMD3Q9UBI1 195 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 P2RX2Q9UBL9 471 aa10.57□□□□□ -0.72
COL27A1-204ENST00000477421 A0A1W2PQU0 124 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 BMP1P13497 986 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 C21orf33P30042 268 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 PGDP52209 483 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF234Q14588 700 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 DEFB134Q4QY38 66 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 TOR1AIP1Q5JTV8 583 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 SLC35F1Q5T1Q4 408 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF683Q8IZ20 524 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CPXM2Q8N436 756 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 UXS1Q8NBZ7 420 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 PSD4Q8NDX1 1056 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 C16orf78Q8WTQ4 265 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 SGCDQ92629 289 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 VMP1Q96GC9 406 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 AHCYL2Q96HN2 611 aaKnown RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 BARD1Q99728 777 aaKnown RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 ITPAQ9BY32 194 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CXXC1Q9P0U4 656 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 RNF6Q9Y252 685 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 HS3ST2Q9Y278 367 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 FAM155AB1AL88 458 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 H3BNC9 293 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 KMOO15229 486 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 SLC16A5O15375 505 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 FRS3O43559 492 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 PRMT3O60678 531 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 RETP07949 1114 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 HOXB2P14652 356 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 KCNC3Q14003 757 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 C5orf22Q49AR2 442 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 XKR7Q5GH72 579 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF311Q5JNZ3 666 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 NLGN4XQ8N0W4 816 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 SPARTQ8N0X7 666 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CENPSQ8N2Z9 138 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 SLC15A4Q8N697 577 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 PCBD2Q9H0N5 130 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 RDH14Q9HBH5 336 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 IL23AQ9NPF7 189 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CLDND1Q9NY35 253 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 NEU3Q9UQ49 428 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 K7ESM1 405 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 PSIP1O75475 530 aaKnown RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 ASGR2P07307 311 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 MYOGP15173 224 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 POLR2CP19387 275 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 BMXP51813 675 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CLCA4Q14CN2 919 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 LARS2Q15031 903 aaKnown RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 MOGQ16653 247 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 SLC5A12Q1EHB4 618 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 CCSAPQ6IQ19 270 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-204ENST00000477421 KLHL17Q6TDP4 642 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 KRT74Q7RTS7 529 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 DEFB119Q8N690 84 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 FATE1Q969F0 183 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 OSBPL10Q9BXB5 764 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 UCK2Q9BZX2 261 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 ABCD2Q9UBJ2 740 aa10.56□□□□□ -0.72
COL27A1-204ENST00000477421 BCAS1O75363 584 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CDC123O75794 336 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 RECKO95980 971 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 MATN1P21941 496 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SOX9P48436 509 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 STXBP1P61764 594 aaKnown RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 PIN1Q13526 163 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SHQ1Q6PI26 577 aaKnown RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 TMPRSS11AQ6ZMR5 421 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 WDR53Q7Z5U6 358 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF655Q8N720 491 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF420Q8TAQ5 688 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 IPCEF1Q8WWN9 437 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SMARCD2Q92925 531 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZSWIM3Q96MP5 696 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 RDH12Q96NR8 316 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 TTTY10Q9BZA0 68 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 MICAL3Q7RTP6 2002 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ANHXE9PGG2 379 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 HLA-DQA2P01906 255 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ITPKBP27987 946 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 IMPA1P29218 277 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms