RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 H0YIV9 168 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 STX16-NPEPL1H3BU86 382 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 STX16O14662 325 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 UGDHO60701 494 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 CBX6O95503 412 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 PPP2R1BP30154 601 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 PIK3CBP42338 1070 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 HSD17B7P56937 341 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 CPSF6Q16630 551 aaKnown RBP eCLIP19.81■□□□□ 0.76
LIME1-204ENST00000476183 TMEM35AQ53FP2 167 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 TEX35Q5T0J7 233 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 DEPDC1Q5TB30 811 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 KHDRBS2Q5VWX1 349 aaKnown RBP19.81■□□□□ 0.76
LIME1-204ENST00000476183 RPUSD3Q6P087 351 aaKnown RBP19.81■□□□□ 0.76
LIME1-204ENST00000476183 CHSY3Q70JA7 882 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 ACOT4Q8N9L9 421 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 L3MBTL4Q8NA19 623 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 SRFBP1Q8NEF9 429 aaKnown RBP19.81■□□□□ 0.76
LIME1-204ENST00000476183 ARMC2Q8NEN0 867 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 OR52B6Q8NGF0 335 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 ADAMTS18Q8TE60 1221 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 GRHL3Q8TE85 626 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 ZNF354BQ96LW1 612 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 CDK15Q96Q40 435 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 MAPKAP1Q9BPZ7 522 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 MRPL57Q9BQC6 102 aaKnown RBP19.81■□□□□ 0.76
LIME1-204ENST00000476183 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.81■□□□□ 0.76
LIME1-204ENST00000476183 MRPL46Q9H2W6 279 aaKnown RBP19.81■□□□□ 0.76
LIME1-204ENST00000476183 NOL11Q9H8H0 719 aaKnown RBP19.81■□□□□ 0.76
LIME1-204ENST00000476183 ZBTB26Q9HCK0 441 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 PRM3Q9NNZ6 103 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 ADGRE2Q9UHX3 823 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 PCTPQ9UKL6 214 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 TSC22D4Q9Y3Q8 395 aa19.81■□□□□ 0.76
LIME1-204ENST00000476183 OR5H15A6NDH6 313 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 SMIM24O75264 130 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 SCELO95171 688 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 HIST1H1TP22492 207 aaPredicted RBP19.8■□□□□ 0.76
LIME1-204ENST00000476183 PIK3CGP48736 1102 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 RPS13P62277 151 aaKnown RBP19.8■□□□□ 0.76
LIME1-204ENST00000476183 EIF2S3LQ2VIR3 472 aaKnown RBP19.8■□□□□ 0.76
LIME1-204ENST00000476183 LGSNQ5TDP6 509 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 RPS27LQ71UM5 84 aaKnown RBP19.8■□□□□ 0.76
LIME1-204ENST00000476183 CLNKQ7Z7G1 428 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 ZNF595Q8IYB9 648 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 FAM26EQ8N5C1 309 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 MTBPQ96DY7 904 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 ROGDIQ9GZN7 287 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 LYRM4Q9HD34 91 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 TMCO1Q9UM00 188 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 PCDHGA11Q9Y5H2 935 aa19.8■□□□□ 0.76
LIME1-204ENST00000476183 CLDN4O14493 209 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 SSR2P43308 183 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 SLC13A2Q13183 592 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 MEP1AQ16819 746 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 AP5B1Q2VPB7 878 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 EIF1ADQ8N9N8 165 aaKnown RBP19.79■□□□□ 0.76
LIME1-204ENST00000476183 WDR20Q8TBZ3 569 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 MZB1Q8WU39 189 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 TAAR6Q96RI8 345 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 PNO1Q9NRX1 252 aaKnown RBP19.79■□□□□ 0.76
LIME1-204ENST00000476183 TMEM216Q9P0N5 145 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 FETUBQ9UGM5 382 aa19.79■□□□□ 0.76
LIME1-204ENST00000476183 MRPS33Q9Y291 106 aaKnown RBP19.79■□□□□ 0.76
LIME1-204ENST00000476183 ZGRF1Q86YA3 2104 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 A0A1B0GTL3 188 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 MYOCOSA0A1B0GUC4 107 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 A8MT66 165 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 PLPP1O14494 284 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 MYO1DO94832 1006 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 CLDN9O95484 217 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 ETHE1O95571 254 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 RPS17P08708 135 aaKnown RBP19.78■□□□□ 0.76
LIME1-204ENST00000476183 NEK2P51955 445 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 TRAF3Q13114 568 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 TUBA3CQ13748 450 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 ZRSR2Q15696 482 aaKnown RBP19.78■□□□□ 0.76
LIME1-204ENST00000476183 OR4C11Q6IEV9 310 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 TUBA3EQ6PEY2 450 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 SLC5A8Q8N695 610 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 APCDD1LQ8NCL9 501 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 FAR1Q8WVX9 515 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 NTMT1Q9BV86 223 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 ZNF717Q9BY31 904 aaPredicted RBP19.78■□□□□ 0.76
LIME1-204ENST00000476183 CDCP1Q9H5V8 836 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 AGPAT4Q9NRZ5 378 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 ANKRD10Q9NXR5 420 aa19.78■□□□□ 0.76
LIME1-204ENST00000476183 PSMC3IPQ9P2W1 217 aaPredicted RBP19.78■□□□□ 0.76
LIME1-204ENST00000476183 SPTBN1Q01082 2364 aaKnown RBP19.78■□□□□ 0.76
LIME1-204ENST00000476183 UTP20O75691 2785 aaKnown RBP19.78■□□□□ 0.76
LIME1-204ENST00000476183 IQANK1A0A1B0GTG1 560 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 PPP6CO00743 305 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 PRAMEF2O60811 474 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 CTNSO60931 367 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 SHBGP04278 402 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 CD96P40200 585 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 GPR143P51810 404 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 CCNG1P51959 295 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 TAS2R50P59544 299 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 RCN2Q14257 317 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms