RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 HIST1H1TP22492 207 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 GNLYP22749 145 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 TSFMP43897 325 aaKnown RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 UQCRFS1P47985 274 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 HSD17B7P56937 341 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 RPS13P62277 151 aaKnown RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 ZRSR2Q15696 482 aaKnown RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 DEPDC1Q5TB30 811 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 CLNKQ7Z7G1 428 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 CNPY4Q8N129 248 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 SLC5A8Q8N695 610 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 ACMSDQ8TDX5 336 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 HAS2Q92819 552 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 RGMAQ96B86 450 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 ZNF354BQ96LW1 612 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 SORBS1Q9BX66 1292 aaKnown RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 LYRM4Q9HD34 91 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 SEMA4BQ9NPR2 832 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 PNO1Q9NRX1 252 aaKnown RBP22.51■■□□□ 1.19
CPNE1-223ENST00000475146 TSC22D4Q9Y3Q8 395 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 SPACA6W5XKT8 324 aa22.51■■□□□ 1.19
CPNE1-223ENST00000475146 CPAMD8Q8IZJ3 1885 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 SMIM23A6NLE4 172 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 CYR61O00622 381 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 SHBGP04278 402 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 RPS17P08708 135 aaKnown RBP22.5■■□□□ 1.19
CPNE1-223ENST00000475146 SBK3P0C264 359 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 TNFSF10P50591 281 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 LCA5Q86VQ0 697 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 CRLF3Q8IUI8 442 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.5■■□□□ 1.19
CPNE1-223ENST00000475146 MAPKAP1Q9BPZ7 522 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 RNF32Q9H0A6 362 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 ANKZF1Q9H8Y5 726 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 ZBTB26Q9HCK0 441 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 ABI3Q9P2A4 366 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 FBXW2Q9UKT8 454 aa22.5■■□□□ 1.19
CPNE1-223ENST00000475146 SHANK1Q9Y566 2161 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 TRAV17A0A0B4J275 112 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 OR5H15A6NDH6 313 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 MYO1DO94832 1006 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 SCELO95171 688 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 PYGBP11216 843 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 SLCO1A2P46721 670 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 NEK2P51955 445 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 TRAF3Q13114 568 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 MEP1AQ16819 746 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 ACER2Q5QJU3 275 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 TTC19Q6DKK2 380 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-223ENST00000475146 OR4C11Q6IEV9 310 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 H3F3CQ6NXT2 135 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 RPS27LQ71UM5 84 aaKnown RBP22.49■■□□□ 1.19
CPNE1-223ENST00000475146 BEST3Q8N1M1 668 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 TMEM151AQ8N4L1 468 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 KIF2BQ8N4N8 673 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 NTMT1Q9BV86 223 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 KCMF1Q9P0J7 381 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 NTNG1Q9Y2I2 539 aa22.49■■□□□ 1.19
CPNE1-223ENST00000475146 TCP11X1B4DZS4 312 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 TGFBR3LH3BV60 316 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 PLPP1O14494 284 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 CPN2P22792 545 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 PTX3P26022 381 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-223ENST00000475146 PPP2R1BP30154 601 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 SLAMF1Q13291 335 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 MILR1Q7Z6M3 343 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 SUN3Q8TAQ9 357 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 WDR20Q8TBZ3 569 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 ELP5Q8TE02 316 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 ZNF483Q8TF39 744 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-223ENST00000475146 MZB1Q8WU39 189 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 MTFMTQ96DP5 389 aaKnown RBP22.48■■□□□ 1.19
CPNE1-223ENST00000475146 AGPAT4Q9NRZ5 378 aa22.48■■□□□ 1.19
CPNE1-223ENST00000475146 OTCP00480 354 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 IFNA16P05015 189 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 TSPAN8P19075 237 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 CDH13P55290 713 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 HERVK_113P63132 956 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 STX4Q12846 297 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 NR6A1Q15406 480 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 NFAM1Q8NET5 270 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-223ENST00000475146 OR4F6Q8NGB9 312 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 ERVK-6Q9BXR3 956 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 PPCSQ9HAB8 311 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 ADAP2Q9NPF8 381 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 CLDN16Q9Y5I7 305 aa22.47■■□□□ 1.19
CPNE1-223ENST00000475146 MYOCOSA0A1B0GUC4 107 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 A0A1W2PPM1 405 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 FOXE1O00358 373 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-223ENST00000475146 ZNF500O60304 480 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-223ENST00000475146 MAN1A2O60476 641 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 CTNSO60931 367 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 GSTA1P08263 222 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 KRT15P19012 456 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 IFT88Q13099 833 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 MRPL49Q13405 166 aaKnown RBP22.46■■□□□ 1.19
CPNE1-223ENST00000475146 CUL3Q13618 768 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 TERF2Q15554 542 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 FRG2Q64ET8 278 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 FAM180AQ6UWF9 173 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms