RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 ZNF665Q9H7R5 613 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 WDR76Q9H967 626 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 TM9SF3Q9HD45 589 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 PRDM4Q9UKN5 801 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 FOXJ3Q9UPW0 622 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 SATB2Q9UPW6 733 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.79□□□□□ -1.8
PGK1-202ENST00000474281 COLEC10Q9Y6Z7 277 aa3.79□□□□□ -1.8
PGK1-202ENST00000474281 IGLV5-45A0A087WSX0 123 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SRRM4A7MD48 611 aaKnown RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 LGALS8O00214 317 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 GLRA3O75311 464 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 DFFBO76075 338 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 OR4F21O95013 312 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 TOMM40O96008 361 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 CA3P07451 260 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 HMBSP08397 361 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SLC1A3P43003 542 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SLC1A6P48664 564 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 OR1D5P58170 312 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 HERV-K104P61576 105 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 HSPA14Q0VDF9 509 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 NME3Q13232 169 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 GRB14Q14449 540 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 MEF2DQ14814 521 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 TMEM132DQ14C87 1099 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 EXOSC7Q15024 291 aaKnown RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 SF3B4Q15427 424 aaKnown RBP eCLIP3.78□□□□□ -1.86e-19■■■■□ 24.8
PGK1-202ENST00000474281 EXT1Q16394 746 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 PDK4Q16654 411 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SHROOM1Q2M3G4 852 aaPredicted RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 ZNF528Q3MIS6 628 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SIRPB2Q5JXA9 342 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 LIPKQ5VXJ0 399 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 OR4C11Q6IEV9 310 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 TRIM65Q6PJ69 517 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 ZYG11AQ6WRX3 759 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 KCTD8Q6ZWB6 473 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 G2E3Q7L622 706 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 TRMT11Q7Z4G4 463 aaKnown RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 SLC22A16Q86VW1 577 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 GPC2Q8N158 579 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 TRIM58Q8NG06 486 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 OR13C3Q8NGS6 347 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 OR13C5Q8NGS8 318 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 RNF139Q8WU17 664 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 ASB5Q8WWX0 329 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 CTNNBL1Q8WYA6 563 aaPredicted RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 RPL36ALQ969Q0 106 aaKnown RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 MCHR2Q969V1 340 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SLC35C1Q96A29 364 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 NSL1Q96IY1 281 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 CCT7Q99832 543 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 JPH2Q9BR39 696 aaPredicted RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 LRRC4Q9HBW1 653 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 TBC1D13Q9NVG8 400 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 RNF186Q9NXI6 227 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 PLEK2Q9NYT0 353 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 RAI14Q9P0K7 980 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 RABL2AQ9UBK7 228 aaPredicted RBP3.78□□□□□ -1.8
PGK1-202ENST00000474281 P2RX2Q9UBL9 471 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 LHX3Q9UBR4 397 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 BCAP29Q9UHQ4 241 aa3.78□□□□□ -1.8
PGK1-202ENST00000474281 SF3B1O75533 1304 aaKnown RBP eCLIP3.77□□□□□ -1.812e-7■■□□□ 13.1
PGK1-202ENST00000474281 IGHV4OR15-8A0A075B7B6 117 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 A0A1W2PS18 150 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 A8MVM7 634 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 K7EQM0 130 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 FPGTO14772 594 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 PPEF2O14830 753 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 P2RX6O15547 441 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 AKAP8O43823 692 aaKnown RBP3.77□□□□□ -1.81
PGK1-202ENST00000474281 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 FRMD6-AS1P0C7T7 363 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 DAOP14920 347 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 RPA2P15927 270 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 ATP6V1C1P21283 382 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 ACKR3P25106 362 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 PPP2R1AP30153 589 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 AXLP30530 894 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 PTGFRP43088 359 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 ABCG1P45844 678 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 DNA2P51530 1060 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 LIMK2P53671 638 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 KLF9Q13886 244 aaPredicted RBP3.77□□□□□ -1.81
PGK1-202ENST00000474281 BTG3Q14201 252 aaPredicted RBP3.77□□□□□ -1.81
PGK1-202ENST00000474281 SQLEQ14534 574 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 OR1C1Q15619 314 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 LRRC37A5PQ49AS3 106 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 SLC25A53Q5H9E4 307 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 LCN1P1Q5VSP4 162 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 LYPLAL1Q5VWZ2 237 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 LIPJQ5W064 366 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 ARHGAP17Q68EM7 881 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 TCEAL6Q6IPX3 200 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 TMEM64Q6YI46 380 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 SLC24A5Q71RS6 500 aa3.77□□□□□ -1.81
PGK1-202ENST00000474281 ANO5Q75V66 913 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms