RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 LURAP1Q96LR2 239 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF597Q96LX8 424 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 TMEM237Q96Q45 408 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PSMB7Q99436 277 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 ATF6BQ99941 703 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 ALKBH7Q9BT30 221 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 RPP25Q9BUL9 199 aaKnown RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PUS3Q9BZE2 481 aaKnown RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 C10orf88Q9H8K7 445 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PRMT8Q9NR22 394 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 DNAJC11Q9NVH1 559 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 CYP39A1Q9NYL5 469 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 KLK11Q9UBX7 282 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 FBXW2Q9UKT8 454 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 STX8Q9UNK0 236 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 HBS1LQ9Y450 684 aaKnown RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 NEDD4P46934 1319 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 IGHV3-20A0A0C4DH32 117 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 C13orf42A0A1B0GVH6 325 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 RNF103O00237 685 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SRSF10O75494 262 aaKnown RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 BCAS2O75934 225 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 GLCEO94923 617 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 MOCS2O96007 188 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 MT-ND2P03891 347 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 PCP11498 1178 aaKnown RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 VCLP18206 1134 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 CTNNB1P35222 781 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 ETV5P41161 510 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 NOVP48745 357 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 STARD6P59095 220 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 WASHC5Q12768 1159 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 GRB14Q14449 540 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF146Q15072 292 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 PPA1Q15181 289 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 UPP1Q16831 310 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 FAM182AQ5T1J6 154 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 FAM46CQ5VWP2 391 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 ETFRF1Q6IPR1 90 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 FAM43BQ6ZT52 329 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 TRMT11Q7Z4G4 463 aaKnown RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 COX8CQ7Z4L0 72 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 RABEPKQ7Z6M1 372 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SLC25A42Q86VD7 318 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 AQP12AQ8IXF9 295 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SLC39A11Q8N1S5 342 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 TEX26Q8N6G2 289 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 OR5M9Q8NGP3 310 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SPPL2AQ8TCT8 520 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 TOMM40LQ969M1 308 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 AP2M1Q96CW1 435 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 PRAM1Q96QH2 718 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 PANX3Q96QZ0 392 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SPXQ9BT56 116 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 OSBPL8Q9BZF1 889 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 AKIRIN1Q9H9L7 192 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 GNB4Q9HAV0 340 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 C3orf14Q9HBI5 128 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SPG21Q9NZD8 308 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 IL19Q9UHD0 177 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 RARRES3Q9UL19 164 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 ISY1Q9ULR0 285 aaKnown RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 NCKAP1Q9Y2A7 1128 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 KLK4Q9Y5K2 254 aa3.17□□□□□ -1.9
BRCA2-202ENST00000470094 SPAG9O60271 1321 aaKnown RBP3.17□□□□□ -1.9
BRCA2-202ENST00000470094 AGRNO00468 2067 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SHISA7A6NL88 538 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 TCP10L2B9ZVM9 353 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SEC22BO75396 215 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 LRCH4O75427 683 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 HOXD4P09016 255 aaPredicted RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SBK2P0C263 348 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 ANKRD34CP0C6C1 535 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SP9P0CG40 484 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 GOT1P17174 413 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 CTNNA2P26232 953 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SERPINB6P35237 376 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 NPBWR1P48145 328 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SLC12A3P55017 1021 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 KRTAP10-3P60369 221 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 IL1RL1Q01638 556 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SGCBQ16585 318 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 TTC31Q49AM3 519 aaPredicted RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 IFI44LQ53G44 452 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SPANXN4Q5MJ08 99 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 PRAMEF8Q5VWM4 474 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 C15orf52Q6ZUT6 534 aaKnown RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 C5orf24Q7Z6I8 188 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 MEX3DQ86XN8 651 aaKnown RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 CATSPER3Q86XQ3 398 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 OR4N5Q8IXE1 308 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 PHC2Q8IXK0 858 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 KLHDC8AQ8IYD2 350 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 RNASE8Q8TDE3 154 aaKnown RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 ST7LQ8TDW4 575 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 RSPH1Q8WYR4 309 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SGF29Q96ES7 293 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 C5orf30Q96GV9 206 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 TSSK2Q96PF2 358 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms