RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 OR1F1O43749 312 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 JRKO75564 520 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 CCNDBP1O95273 360 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ITGB7P26010 798 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 OPRL1P41146 370 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ARHGDIAP52565 204 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 DCDC1P59894 354 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 DNASE1L3Q13609 305 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ZNF846Q147U1 533 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 RGNQ15493 299 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 FXNQ16595 210 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 HIST2H2ACQ16777 129 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 WDR45BQ5MNZ6 344 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 HIST2H2AA3Q6FI13 130 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 KIAA1211LQ6NV74 962 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 SHQ1Q6PI26 577 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 AADATQ8N5Z0 425 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 OR5K1Q8NHB7 308 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 UTP15Q8TED0 518 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 GTPBP3Q969Y2 492 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 NACC2Q96BF6 587 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 REEP1Q9H902 201 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MARCH7Q9H992 704 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 C3orf18Q9UK00 162 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 GPSM3Q9Y4H4 160 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 GMPPBQ9Y5P6 360 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ARHGEF17Q96PE2 2063 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 H0YIV9 168 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 SUV39H1O43463 412 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 LILRB5O75023 590 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ANGPTL1O95841 491 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 HTR1AP08908 422 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 C8orf89P0DMQ9 161 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 CRHBPP24387 322 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MASP1P48740 699 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 NKX2-5P52952 324 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 GRSF1Q12849 480 aaKnown RBP eCLIP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 TP53BP2Q13625 1128 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ZNF750Q32MQ0 723 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 TTC23Q5W5X9 447 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 LAIR2Q6ISS4 152 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 VITQ6UXI7 678 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 USP51Q70EK9 711 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MEX3DQ86XN8 651 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 SNX29P2Q8IUI4 249 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 GOLM1Q8NBJ4 401 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 VANGL1Q8TAA9 524 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 FGF14Q92915 247 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 C12orf66Q96MD2 445 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 FCRL4Q96PJ5 515 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 SLC6A16Q9GZN6 736 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ROGDIQ9GZN7 287 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 TP63Q9H3D4 680 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MOV10Q9HCE1 1003 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 DMRT3Q9NQL9 472 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 KRT84Q9NSB2 600 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MARK1Q9P0L2 795 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 ZNF639Q9UID6 485 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 SAMD4AQ9UPU9 718 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MAN2B2Q9Y2E5 1009 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 YBX2Q9Y2T7 364 aaKnown RBP9.01□□□□□ -0.97
TOP3A-203ENST00000469739 CABIN1Q9Y6J0 2220 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 MUC3AQ02505 3323 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 TRIM64A6NGJ6 449 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 AGRPO00253 132 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 NARSO43776 548 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 ERAL1O75616 437 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 RETP07949 1114 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SRPRAP08240 638 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 HNRNPA1P09651 372 aaKnown RBP eCLIP9□□□□□ -0.97
TOP3A-203ENST00000469739 PSMB9P28065 219 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 OPRD1P41143 372 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 TMBIM6P55061 237 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ZNF763Q0D2J5 394 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ELP6Q0PNE2 266 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CSTF3Q12996 717 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 TMEM236Q5W0B7 351 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 NXPE4Q6UWF7 544 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 PARM1Q6UWI2 310 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 RFPL4BQ6ZWI9 263 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 AHSA2Q719I0 299 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 DSG4Q86SJ6 1040 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ANKRD13BQ86YJ7 626 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CLIP4Q8N3C7 705 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 TTC29Q8NA56 475 aaPredicted RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 OR9Q2Q8NGE9 314 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 C16orf78Q8WTQ4 265 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CHTF18Q8WVB6 975 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SH3YL1Q96HL8 342 aaPredicted RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 C17orf62Q9BQA9 187 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ZCCHC2Q9C0B9 1178 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 HMG20AQ9NP66 347 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9□□□□□ -0.97
TOP3A-203ENST00000469739 SLC6A14Q9UN76 642 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 WDFY4Q6ZS81 3184 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 TDRD6O60522 2096 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 EPOPA6NHQ4 379 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 RGS13O14921 159 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CLK3P49761 638 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms