RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 IRF8Q02556 426 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 DSC1Q08554 894 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 ZNF770Q6IQ21 691 aaPredicted RBP18.89■□□□□ 0.61
SDF4-205ENST00000465727 OXR1Q8N573 874 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 MS4A4AQ96JQ5 239 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 B3GNT2Q9NY97 397 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 CLEC2DQ9UHP7 191 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 J3KTA2 159 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 SLC10A3P09131 477 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 C1SP09871 688 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 IDSP22304 550 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 PTBP1P26599 531 aaKnown RBP eCLIP18.88■□□□□ 0.61
SDF4-205ENST00000465727 CCR7P32248 378 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 HOXC5Q00444 222 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 MAP2K5Q13163 448 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 CCL15Q16663 113 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ZNF630Q2M218 657 aaPredicted RBP18.88■□□□□ 0.61
SDF4-205ENST00000465727 ANGPTL8Q6UXH0 198 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 TAGAPQ8N103 731 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 C19orf18Q8NEA5 215 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 PLD4Q96BZ4 506 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 SEPT5Q99719 369 aaPredicted RBP18.88■□□□□ 0.61
SDF4-205ENST00000465727 BHLHE41Q9C0J9 482 aaPredicted RBP18.88■□□□□ 0.61
SDF4-205ENST00000465727 GPATCH2Q9NW75 528 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 KCND3Q9UK17 655 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ALG5Q9Y673 324 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 TEX51A0A1B0GUA7 166 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 B4GALT3O60512 393 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 SRPRAP08240 638 aaKnown RBP18.88■□□□□ 0.61
SDF4-205ENST00000465727 MSL3P1P0C860 447 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 PRKAR1AP10644 381 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ACADMP11310 421 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 OSMP13725 252 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ETFAP13804 333 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 CPEP16870 476 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 SGSHP51688 502 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 PPP3R1P63098 170 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 MXD1Q05195 221 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ILKQ13418 452 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 BTBD16Q32M84 506 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ZNF628Q5EBL2 1059 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 TRIQKQ629K1 86 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 METAP1DQ6UB28 335 aaPredicted RBP18.88■□□□□ 0.61
SDF4-205ENST00000465727 BPHLQ86WA6 291 aaPredicted RBP18.88■□□□□ 0.61
SDF4-205ENST00000465727 RNF175Q8N4F7 328 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 IL4I1Q96RQ9 567 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 UCK2Q9BZX2 261 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 ZDHHC3Q9NYG2 299 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 TMPRSS11EQ9UL52 423 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 TMCC3Q9ULS5 477 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 PCDHGB7Q9Y5F8 929 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 SNX11Q9Y5W9 270 aa18.88■□□□□ 0.61
SDF4-205ENST00000465727 UPK3BL1B0FP48 263 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 UPK3BL2E5RIL1 263 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 AP2A2O94973 939 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 ANXA4P09525 319 aaPredicted RBP18.87■□□□□ 0.61
SDF4-205ENST00000465727 POU1F1P28069 291 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 SDC2P34741 201 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 TGM4P49221 684 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 MAB21L1Q13394 359 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 KCNC3Q14003 757 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 CDKN3Q16667 212 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 MORN1Q5T089 497 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 LIPKQ5VXJ0 399 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 TRIM40Q6P9F5 258 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 GLB1LQ6UWU2 654 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 PAMR1Q6UXH9 720 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 SLC30A8Q8IWU4 369 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 SIX5Q8N196 739 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 HJURPQ8NCD3 748 aaPredicted RBP18.87■□□□□ 0.61
SDF4-205ENST00000465727 OR8J1Q8NGP2 316 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 NFKBIDQ8NI38 313 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 KCTD7Q96MP8 289 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 NELL2Q99435 816 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 COQ7Q99807 217 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 ARPC5LQ9BPX5 153 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 VWA8A3KMH1 1905 aa18.87■□□□□ 0.61
SDF4-205ENST00000465727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.86■□□□□ 0.61
SDF4-205ENST00000465727 MGAT4DA6NG13 374 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 CLDN7O95471 211 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 IFNW1P05000 195 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 SLC2A2P11168 524 aaPredicted RBP18.86■□□□□ 0.61
SDF4-205ENST00000465727 SRCP12931 536 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 ITPKAP23677 461 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 CDK6Q00534 326 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 ZNF91Q05481 1191 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 EEF1A2Q05639 463 aaKnown RBP18.86■□□□□ 0.61
SDF4-205ENST00000465727 ANGPT1Q15389 498 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 OCLNQ16625 522 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 SPIN4Q56A73 249 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 COX20Q5RI15 118 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 ATXN7L2Q5T6C5 722 aaPredicted RBP18.86■□□□□ 0.61
SDF4-205ENST00000465727 C12orf73Q69YU5 71 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 TPGS1Q6ZTW0 290 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 FAM217AQ8IXS0 508 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 SLC38A6Q8IZM9 456 aa18.86■□□□□ 0.61
SDF4-205ENST00000465727 ANKK1Q8NFD2 765 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms