RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 RPLP0P05388 317 aaKnown RBP17.49■□□□□ 0.39
SYNE4-204ENST00000465425 STSP08842 583 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 RHCEP18577 417 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 UGT2B10P36537 528 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 FNDC3BQ53EP0 1204 aaKnown RBP17.49■□□□□ 0.39
SYNE4-204ENST00000465425 ZNF765Q7L2R6 523 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 AMER2Q8N7J2 671 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 PSMA8Q8TAA3 256 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 RAD51AP1Q96B01 352 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 LINC00615Q96LM1 132 aaPredicted RBP17.49■□□□□ 0.39
SYNE4-204ENST00000465425 SORBS1Q9BX66 1292 aaKnown RBP17.49■□□□□ 0.39
SYNE4-204ENST00000465425 MMP27Q9H306 513 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 TAAR2Q9P1P5 351 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 GPR34Q9UPC5 381 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 C5orf58C9J3I9 102 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 SERPINB7O75635 380 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 PPP5CP53041 499 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 CYP4F2P78329 520 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 DNASE1L3Q13609 305 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 EIF4HQ15056 248 aaKnown RBP17.49■□□□□ 0.39
SYNE4-204ENST00000465425 TCEAL5Q5H9L2 206 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 REEP3Q6NUK4 255 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 CEACAM20Q6UY09 585 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 PLEKHG7Q6ZR37 379 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 C12orf40Q86WS4 652 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 MMP21Q8N119 569 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 AQP11Q8NBQ7 271 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 OR8D1Q8WZ84 308 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 ITFG2Q969R8 447 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 C6orf62Q9GZU0 229 aaPredicted RBP17.49■□□□□ 0.39
SYNE4-204ENST00000465425 MS4A12Q9NXJ0 267 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 GIN1Q9NXP7 522 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 SPATA7Q9P0W8 599 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 PLAGL1Q9UM63 463 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 LOC100506127A0A0U1RQW1 187 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 TRIM43BA6NCK2 446 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ANKDD1BA6NHY2 528 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 SH3BP5O60239 455 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ADH1CP00326 375 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 HSMCR30P0CW71 290 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ADORA3P0DMS8 318 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ACADLP28330 430 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 VEGFBP49765 207 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 HMGA2P52926 109 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 OLR1P78380 273 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 PTGES3Q15185 160 aaKnown RBP17.48■□□□□ 0.39
SYNE4-204ENST00000465425 MAPK11Q15759 364 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 PRSS53Q2L4Q9 553 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 LCTLQ6UWM7 567 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 SLC46A3Q7Z3Q1 461 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 SLC9B2Q86UD5 537 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ARRDC3Q96B67 414 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 TRIM43Q96BQ3 446 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-204ENST00000465425 MAPKAP1Q9BPZ7 522 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ZDHHC5Q9C0B5 715 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 DYRK4Q9NR20 520 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 RHCGQ9UBD6 479 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ICKQ9UPZ9 632 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 M0R129 80 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 PLK4O00444 970 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 CNOT3O75175 753 aaKnown RBP17.48■□□□□ 0.39
SYNE4-204ENST00000465425 ADRB3P13945 408 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 CEBPBP17676 345 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 GABRB1P18505 474 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 KELP23276 732 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 DPTQ07507 201 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 RTL10Q7L3V2 364 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 KIAA1958Q8N8K9 716 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 OR5AR1Q8NGP9 310 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 PPP1R16AQ96I34 528 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 CXorf36Q9H7Y0 433 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 PAIP2BQ9ULR5 123 aaKnown RBP17.48■□□□□ 0.39
SYNE4-204ENST00000465425 TSC22D4Q9Y3Q8 395 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 PRKAB1Q9Y478 270 aa17.48■□□□□ 0.39
SYNE4-204ENST00000465425 VEGFDO43915 354 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 PAPLNO95428 1278 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 DBTP11182 482 aaKnown RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 TGM1P22735 817 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 TPP2P29144 1249 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 CD40LGP29965 261 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 LIMS1P48059 325 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 ALDH9A1P49189 494 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 MAPK12P53778 367 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 MANFP55145 182 aaKnown RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 DUSP7Q16829 419 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 ARMCX4Q5H9R4 360 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 VN1R5Q7Z5H4 357 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 C17orf64Q86WR6 236 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 KBTBD8Q8NFY9 601 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 INSL6Q9Y581 213 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 TLL1O43897 1013 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 MPZL2O60487 215 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 PTHP01270 115 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 BCHEP06276 602 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 DDCP20711 480 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 CTNNB1P35222 781 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 SFSWAPQ12872 951 aaKnown RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 TNFAIP8L2Q6P589 184 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms