RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CD22P20273 847 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CORO1AP31146 461 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 IFNA8P32881 189 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 GPC1P35052 558 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 THPOP40225 353 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CRATP43155 626 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 MAPK8P45983 427 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 OR1E2P47887 323 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 OR1G1P47890 313 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CSNK1DP48730 415 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 SLC9A3P48764 834 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 AP2S1P53680 142 aaPredicted RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 PFN3P60673 137 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ZNF91Q05481 1191 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 HNRNPA0Q13151 305 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 ILKQ13418 452 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 VEPH1Q14D04 833 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 OCLNQ16625 522 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 SPIN4Q56A73 249 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ZNF628Q5EBL2 1059 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 DGKKQ5KSL6 1271 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 PLEKHS1Q5SXH7 462 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ADGRF1Q5T601 910 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ATXN7L2Q5T6C5 722 aaPredicted RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 GRHL2Q6ISB3 625 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 MZT2BQ6NZ67 158 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 METAP1DQ6UB28 335 aaPredicted RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 PLET1Q6UQ28 207 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 LYPD8Q6UX82 237 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 RASGRP3Q8IV61 690 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 PHC2Q8IXK0 858 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 KLHDC8AQ8IYD2 350 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ELMOD2Q8IZ81 293 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 SPERTQ8NA61 448 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 DUSP18Q8NEJ0 188 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 OR5H6Q8NGV6 325 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CDC26Q8NHZ8 85 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 NFKBIDQ8NI38 313 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 UBASH3BQ8TF42 649 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 DEDD2Q8WXF8 326 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 SNAPC3Q92966 411 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 DIRAS2Q96HU8 199 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 LYSMD1Q96S90 227 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 UCK2Q9BZX2 261 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CRISPLD1Q9H336 500 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ANKRA2Q9H9E1 313 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ATP13A2Q9NQ11 1180 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 GPATCH2Q9NW75 528 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 TXNL4BQ9NX01 149 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 TOR4AQ9NXH8 423 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 AFF4Q9UHB7 1163 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 CLEC2DQ9UHP7 191 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 PHF11Q9UIL8 331 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ANGPT4Q9Y264 503 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 FCF1Q9Y324 198 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 GPSM3Q9Y4H4 160 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ALPK3Q96L96 1907 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 PRAMEF33A0A0G2JMD5 474 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 LINC00854A0A1B0GVQ3 168 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 A0A1W2PQL4 384 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 J3KTA2 159 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 STK25O00506 426 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 MYL12BO14950 172 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 PRAMEF10O60809 474 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 DUSP11O75319 330 aaKnown RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 STC2O76061 302 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CLDN7O95471 211 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 EOMESO95936 686 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 GASTP01350 101 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 IFNW1P05000 195 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SLC10A3P09131 477 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ANXA4P09525 319 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 OR56A5P0C7T3 313 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 MSL3P1P0C860 447 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ARAFP10398 606 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ACADMP11310 421 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CKMT1AP12532 417 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 AKR1A1P14550 325 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 POU2F1P14859 743 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CPEP16870 476 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ZNF30P17039 623 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ITPKAP23677 461 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TIA1P31483 386 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP48-206ENST00000464577 IRS1P35568 1242 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 HNF1BP35680 557 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 RAB25P57735 213 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 PPP3R1P63098 170 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 DAB2P98082 770 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 HOXC5Q00444 222 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CDK6Q00534 326 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 B4GALNT1Q00973 533 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ARHGEF6Q15052 776 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TATDN3Q17R31 274 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.29
USP48-206ENST00000464577 PYDC2Q56P42 97 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CLLU1OSQ5K130 101 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 COX20Q5RI15 118 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms