RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FGF3P11487 239 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CERS1P27544 350 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 HMGCLP35914 325 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 POLD2P49005 469 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CTSCP53634 463 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 RPL26P61254 145 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CAV1Q03135 178 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 RAD51Q06609 339 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SGCGQ13326 291 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PTK2BQ14289 1009 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 C16orf72Q14CZ0 275 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ACOX1Q15067 660 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ELOCQ15369 112 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 TTMPQ5BVD1 217 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 DNAJC21Q5F1R6 531 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 RNASE12Q5GAN4 147 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SPANXN3Q5MJ09 141 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CFAP58Q5T655 872 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CCDC70Q6NSX1 233 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 EMBQ6PCB8 327 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 TMEM207Q6UWW9 146 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CMC1Q7Z7K0 106 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PIM3Q86V86 326 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 KCNMB4Q86W47 210 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SFTPA2Q8IWL1 248 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 IZUMO1Q8IYV9 350 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 KRT222Q8N1A0 295 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 FSTL5Q8N475 847 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PAF1Q8N7H5 531 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 DENND6BQ8NEG7 585 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PPHLN1Q8NEY8 458 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GSDMBQ8TAX9 411 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 STYXQ8WUJ0 223 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 DAZAP1Q96EP5 407 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PRR25Q96S07 402 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PAFAH2Q99487 392 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 NRTNQ99748 197 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 OLFM1Q99784 485 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 FERMT1Q9BQL6 677 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ADGRE3Q9BY15 652 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 UNKQ9C0B0 810 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 BRINP2Q9C0B6 783 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CAB39LQ9H9S4 337 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 MRM3Q9HC36 420 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 MRPL40Q9NQ50 206 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PRDM8Q9NQV8 689 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 C20orf96Q9NUD7 363 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ZIM2Q9NZV7 527 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 KLHL13Q9P2N7 655 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 MTRF1LQ9UGC7 380 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 APOBEC3BQ9UH17 382 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 RPL26L1Q9UNX3 145 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 OR1A2Q9Y585 309 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 RNF215Q9Y6U7 377 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 RP1P56715 2156 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 NF1P21359 2839 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 F8P00451 2351 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 TRBV5-4A0A0C4DH59 114 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GLYATL1P3A0A0U1RQE8 302 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GOLGA6CA6NDK9 693 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GOLGA6BA6NDN3 693 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 AGAP14A8MT82 685 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 POC1B-GALNT4F8VUJ3 575 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 H3BML4 177 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 H7C0S8 307 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 STX7O15400 261 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PHGDHO43175 533 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 TSPAN6O43657 245 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 NIPSNAP2O75323 286 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SRP72O76094 671 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SYF2O95926 243 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ABHD2P08910 425 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 NUDT17P0C025 328 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GOLGA6DP0CG33 693 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SPAM1P38567 509 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 BLKP51451 505 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ARFIP2P53365 341 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CDKN2DP55273 166 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 DLG1Q12959 904 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SLC13A2Q13183 592 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 NFATC2Q13469 925 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GRM3Q14832 879 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 KIF26BQ2KJY2 2108 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 TYSND1Q2T9J0 566 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ZRANB3Q5FWF4 1079 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 GPRC6AQ5T6X5 926 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF470Q6ECI4 717 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 ERAP2Q6P179 960 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 PACS1Q6VY07 963 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 MACC1Q6ZN28 852 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CDHR3Q6ZTQ4 885 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 MARK2Q7KZI7 788 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 TRMT10CQ7L0Y3 403 aaKnown RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 DET1Q7L5Y6 550 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SERPINA9Q86WD7 417 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 HEATR4Q86WZ0 1026 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 C17orf82Q86X59 251 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CEP97Q8IW35 865 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 CNTN4Q8IWV2 1026 aa3.48□□□□□ -1.85
SCFD1-204ENST00000463622 SLC34A3Q8N130 599 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms