RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CLYBLQ8N0X4 340 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 EFCAB3Q8N7B9 438 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 RAB3IL1Q8TBN0 382 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 HBEGFQ99075 208 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 MRPL1Q9BYD6 325 aaKnown RBP18.66■□□□□ 0.58
COL9A3-204ENST00000463487 WDR41Q9HAD4 459 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 MLXIPLQ9NP71 852 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 P4HTMQ9NXG6 502 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 FIS1Q9Y3D6 152 aa18.66■□□□□ 0.58
COL9A3-204ENST00000463487 PRMT3O60678 531 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 B4GALT2O60909 372 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 JRKO75564 520 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 CHRNGP07510 517 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 FGF4P08620 206 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 CPN2P22792 545 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 BSGP35613 385 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 FOXA1P55317 472 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 HSD17B7P56937 341 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 FOXL2P58012 376 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ABCE1P61221 599 aaKnown RBP18.65■□□□□ 0.58
COL9A3-204ENST00000463487 AP2B1P63010 937 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ACSM2AQ08AH3 577 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 STX3Q13277 289 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ABRAXAS2Q15018 415 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 NSDHLQ15738 373 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 HSP90B2PQ58FF3 399 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 TTMPQ5BVD1 217 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 SPDYAQ5MJ70 313 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 SH2D4BQ5SQS7 431 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ATG16L1Q676U5 607 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ACSM2BQ68CK6 577 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 CLEC6AQ6EIG7 209 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ZNF793Q6ZN11 406 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 COMMD6Q7Z4G1 85 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 GPR180Q86V85 440 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 METTL4Q8N3J2 472 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 FAM47BQ8NA70 645 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 OR6Y1Q8NGX8 325 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 CCT7Q99832 543 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 ACPTQ9BZG2 426 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 PRDM9Q9NQV7 894 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 LANCL2Q9NS86 450 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 TRAF6Q9Y4K3 522 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 HS3ST3B1Q9Y662 390 aa18.65■□□□□ 0.58
COL9A3-204ENST00000463487 PKD1L2Q7Z442 2459 aa18.64■□□□□ 0.58
COL9A3-204ENST00000463487 A0A0A6YYD5 115 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 ARGFXA6NJG6 315 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 ERVH48-1M5A8F1 160 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 SLC28A1O00337 649 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 RGS14O43566 566 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 KLHL41O60662 606 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 PPP2R1BP30154 601 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 HTR6P50406 440 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 SLC13A2Q13183 592 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 TBR1Q16650 682 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 CCNYL2Q5T2Q4 361 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 IRAK1BP1Q5VVH5 260 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 KANK2Q63ZY3 851 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 FAAH2Q6GMR7 532 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 RNF165Q6ZSG1 346 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 TRIM46Q7Z4K8 759 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 APLFQ8IW19 511 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-204ENST00000463487 PLPP5Q8NEB5 264 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 PTCHD1Q96NR3 888 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 ILKAPQ9H0C8 392 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-204ENST00000463487 ING2Q9H160 280 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 PRTFDC1Q9NRG1 225 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 RIC8BQ9NVN3 520 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 FBXL4Q9UKA2 621 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 FBXW2Q9UKT8 454 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-204ENST00000463487 KCNMB2Q9Y691 235 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 NUP210LQ5VU65 1888 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 EPG5Q9HCE0 2579 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 CCDC88CQ9P219 2028 aa18.64■□□□□ 0.57
COL9A3-204ENST00000463487 NSG1A0A0A6YYJ2 146 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 SOCS6O14544 535 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 SASH3O75995 380 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 RSL1D1O76021 490 aaKnown RBP18.63■□□□□ 0.57
COL9A3-204ENST00000463487 MYO1DO94832 1006 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 KLK1P06870 262 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 FAM58BPP0C7Q3 252 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 BGNP21810 368 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 SLC1A6P48664 564 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 MAPK12P53778 367 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 RHAGQ02094 409 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 TNFRSF17Q02223 184 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 TMEM205Q6UW68 189 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 KIRREL2Q6UWL6 708 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 DDIASQ8IXT1 998 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 C1orf52Q8N6N3 182 aaKnown RBP18.63■□□□□ 0.57
COL9A3-204ENST00000463487 OR11G2Q8NGC1 345 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 AGR3Q8TD06 166 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 EXTL1Q92935 676 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 METTL2AQ96IZ6 378 aaKnown RBP18.63■□□□□ 0.57
COL9A3-204ENST00000463487 MAPKAP1Q9BPZ7 522 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 SORBS1Q9BX66 1292 aaKnown RBP18.63■□□□□ 0.57
COL9A3-204ENST00000463487 ZNF717Q9BY31 904 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-204ENST00000463487 ATP13A2Q9NQ11 1180 aa18.63■□□□□ 0.57
COL9A3-204ENST00000463487 CACNA1BQ00975 2339 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms