RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 TRAF4Q9BUZ4 470 aaPredicted RBP8.35□□□□□ -1.07
SHQ1-203ENST00000463369 FICDQ9BVA6 458 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 PRRG3Q9BZD7 231 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 SLC22A4Q9H015 551 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 DYRK4Q9NR20 520 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 VNN3Q9NY84 501 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 SUSD2Q9UGT4 822 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 FBXW11Q9UKB1 542 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 RIMKLBQ9ULI2 386 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 SNX7Q9UNH6 387 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 CFL2Q9Y281 166 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 KLK4Q9Y5K2 254 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 INSL5Q9Y5Q6 135 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 CDH23Q9H251 3354 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 MYLKQ15746 1914 aa8.35□□□□□ -1.07
SHQ1-203ENST00000463369 B4DXG7 233 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SLC9A3R1O14745 358 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CYP7B1O75881 506 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ANXA9O76027 345 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 GLUD1P00367 558 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ADORA3P0DMS8 318 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF37AP17032 561 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CD72P21854 359 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 HOXA9P31269 272 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CSTF2P33240 577 aaKnown RBP eCLIP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ADRA1AP35348 466 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 HSD17B2P37059 387 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 RGS6P49758 472 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SNTA1Q13424 505 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 OR4D1Q15615 310 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 BTBD16Q32M84 506 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CARD16Q5EG05 197 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 C6orf136Q5SQH8 315 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 NDUFAF5Q5TEU4 345 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SYPL2Q5VXT5 272 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 LAMTOR1Q6IAA8 161 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 GPR149Q86SP6 731 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 LURAP1LQ8IV03 231 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 RNF152Q8N8N0 203 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CDYL2Q8N8U2 506 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 KREMEN2Q8NCW0 462 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 OR2T11Q8NH01 316 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF675Q8TD23 568 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SH3RF2Q8TEC5 729 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 APH1BQ8WW43 257 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ST8SIA4Q92187 359 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 C1GALT1C1Q96EU7 318 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 THUMPD3Q9BV44 507 aaKnown RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 TRIM62Q9BVG3 475 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 FAM83DQ9H4H8 585 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ABCC13Q9NSE7 274 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 VAPAQ9P0L0 249 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 YIPF1Q9Y548 306 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 AUP1Q9Y679 476 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 NUP210Q8TEM1 1887 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 A0A0B4J293 547 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 A0A0G2JPF8 293 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 EPOPA6NHQ4 379 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 HNRNPCL3B7ZW38 293 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ATP6V1G2-DDX39BF2Z307 99 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 KIAA0513O60268 411 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CREG1O75629 220 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 PAPSS2O95340 614 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 HNRNPCL4P0DMR1 293 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 UROSP10746 265 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 HMGA1P17096 107 aaKnown RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 CHMP24386 653 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 EPHA2P29317 976 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 TALDO1P37837 337 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SLC19A1P41440 591 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ARHGDIAP52565 204 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 EPHB3P54753 998 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SNRPD2P62316 118 aaKnown RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ALDH6A1Q02252 535 aaKnown RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SCN1BQ07699 218 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 TWF1Q12792 350 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 PLD1Q13393 1074 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ASAH1Q13510 395 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 MFSD13AQ14CX5 517 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 TOR1AIP1Q5JTV8 583 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SNX20Q7Z614 316 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 SCD5Q86SK9 330 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 PIM3Q86V86 326 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 TRIM48Q8IWZ4 208 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 RYBPQ8N488 228 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 PNPLA1Q8N8W4 532 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF557Q8N988 423 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-203ENST00000463369 FNDC5Q8NAU1 212 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 RHEBL1Q8TAI7 183 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 ASB15Q8WXK1 588 aa8.34□□□□□ -1.07
SHQ1-203ENST00000463369 MYDGFQ969H8 173 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms