RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 MS4A8Q9BY19 250 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 ROGDIQ9GZN7 287 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 COPS7BQ9H9Q2 264 aaPredicted RBP11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 PNO1Q9NRX1 252 aaKnown RBP11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZDHHC18Q9NUE0 388 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 KCMF1Q9P0J7 381 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 SUCOQ9UBS9 1254 aaKnown RBP11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZNF223Q9UK11 482 aaPredicted RBP11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 ACOT9Q9Y305 439 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 MYO7BQ6PIF6 2116 aa11.02□□□□□ -0.65
SOX2-OT-201ENST00000460739 CACNA1DQ01668 2161 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 TRBV11-1A0A0K0K1C0 115 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CCDC189A1A4V9 331 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 HMX2A2RU54 273 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 K7EPI3 171 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 UBXN8O00124 270 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CCL21O00585 134 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CTNSO60931 367 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 MTHFD2P13995 350 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 PPP2R1BP30154 601 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 SERPINB1P30740 379 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 MSH2P43246 934 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 SLC7A5Q01650 507 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CKAP4Q07065 602 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 ELAVL1Q15717 326 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 TMEM35AQ53FP2 167 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 C8orf74Q6P047 294 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 Q6ZPB1 254 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 UBE3DQ7Z6J8 389 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CENPLQ8N0S6 344 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 TMEM132CQ8N3T6 1108 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 SRFBP1Q8NEF9 429 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 RHEBL1Q8TAI7 183 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZNF473Q8WTR7 871 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 ITLN2Q8WWU7 325 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 UBE2E3Q969T4 207 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 NCLNQ969V3 563 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 TMEM125Q96AQ2 219 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 NXNL1Q96CM4 212 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CCDC120Q96HB5 630 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 CSF3RQ99062 836 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 LRRC1Q9BTT6 524 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 TBCDQ9BTW9 1192 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 TSPAN10Q9H1Z9 355 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 LYRM4Q9HD34 91 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 ADAP2Q9NPF8 381 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 OPTCQ9UBM4 332 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 ENTPD4Q9Y227 616 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
SOX2-OT-201ENST00000460739 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
SOX2-OT-201ENST00000460739 A0A087X1B8 175 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 SYCE1LA8MT33 242 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 SUPT3HB4E1H0 165 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 ASNA1O43681 348 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 SUPT3HO75486 399 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 ITGA10O75578 1167 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 SCELO95171 688 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 C2P06681 752 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 EPB42P16452 691 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 ATP5A1P25705 553 aaKnown RBP11□□□□□ -0.65
SOX2-OT-201ENST00000460739 CASP6P55212 293 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 IRF9Q00978 393 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 ART3Q13508 389 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 NAA30Q147X3 362 aaPredicted RBP11□□□□□ -0.65
SOX2-OT-201ENST00000460739 FAM83EQ2M2I3 478 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 RNFT1Q5M7Z0 435 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 MED27Q6P2C8 311 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 RPTNQ6XPR3 784 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZNF793Q6ZN11 406 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 CHSY3Q70JA7 882 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 CLNKQ7Z7G1 428 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 CPSF7Q8N684 471 aaKnown RBP11□□□□□ -0.65
SOX2-OT-201ENST00000460739 ACOT4Q8N9L9 421 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 POGLUT1Q8NBL1 392 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 OR7G3Q8NG95 312 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 KCTD4Q8WVF5 259 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 CMTM7Q96FZ5 175 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 CCDC77Q9BR77 488 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 VTI1BQ9UEU0 232 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 FBXW2Q9UKT8 454 aa11□□□□□ -0.65
SOX2-OT-201ENST00000460739 KLF2Q9Y5W3 355 aaPredicted RBP11□□□□□ -0.65
SOX2-OT-201ENST00000460739 APCP25054 2843 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 GTF3C1Q12789 2109 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 TMEM200CA6NKL6 621 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 NPIPA5E9PKD4 350 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 RTCAO00442 366 aaKnown RBP10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 KLK8O60259 260 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 PRKNO60260 465 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZFAND5O76080 213 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 KLHL2O95198 593 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 TGFB1P01137 390 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 PCNAP12004 261 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 ZNF24P17028 368 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 HIST1H1TP22492 207 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 PHBP35232 272 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 STX4Q12846 297 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 BMPR2Q13873 1038 aa10.99□□□□□ -0.65
SOX2-OT-201ENST00000460739 SETDB1Q15047 1291 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms