RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 KLHL31Q9H511 634 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 UCK1Q9HA47 277 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 BAIAP2L1Q9UHR4 511 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 POMT2Q9UKY4 750 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 SNX6Q9UNH7 406 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 APOBEC2Q9Y235 224 aaKnown RBP9.84□□□□□ -0.83
USP39-210ENST00000459775 GPR52Q9Y2T5 361 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 WDFY3Q8IZQ1 3526 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 MAP1BP46821 2468 aaKnown RBP9.84□□□□□ -0.83
USP39-210ENST00000459775 LILRA5A6NI73 299 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CAPN14A8MX76 684 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 C1QTNF9BB2RNN3 333 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 C4orf51C9J302 202 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 SLCO1B7G3V0H7 640 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CDK2AP1O14519 115 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 FRS3O43559 492 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 DFNA5O60443 496 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 UGDHO60701 494 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 C1QTNF9P0C862 333 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 ALPPL2P10696 532 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CEACAM1P13688 526 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CD59P13987 128 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 EZRP15311 586 aaKnown RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 CTRB1P17538 263 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CFL1P23528 166 aaKnown RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 DPP6P42658 865 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 NAA20P61599 178 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 REEP5Q00765 189 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 PCDH1Q08174 1060 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 ZNF124Q15973 351 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 SPRED3Q2MJR0 410 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 AP5B1Q2VPB7 878 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 C6orf136Q5SQH8 315 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 ZNF574Q6ZN55 896 aaPredicted RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 RHOUQ7L0Q8 258 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 PAQR7Q86WK9 346 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TREML1Q86YW5 311 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 LAS2Q8IYD9 372 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 OR9I1Q8NGQ6 314 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 CLHC1Q8NHS4 586 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 RHBDD1Q8TEB9 315 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 FAR2Q96K12 515 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 F2RL3Q96RI0 385 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 AIF1LQ9BQI0 150 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 EFCAB11Q9BUY7 163 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 DUSP23Q9BVJ7 150 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 EBPLQ9BY08 206 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 MYLK2Q9H1R3 596 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 SRA1Q9HD15 236 aaKnown RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 DMRT3Q9NQL9 472 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 C8orf4Q9NR00 106 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 BAG5Q9UL15 447 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 NEUROG3Q9Y4Z2 214 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 PCDHB3Q9Y5E6 796 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 PCDHGA11Q9Y5H2 935 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 RP1P56715 2156 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 SEC22BO75396 215 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 RASSF9O75901 435 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 EIF2S1P05198 315 aaKnown RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 HEXBP07686 556 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TACR1P25103 407 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 RPL38P63173 70 aaKnown RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 CYLC2Q14093 348 aaPredicted RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 IMPG1Q17R60 797 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 ACAD11Q709F0 780 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TRIM46Q7Z4K8 759 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 VN1R4Q7Z5H5 301 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 P3H2Q8IVL5 708 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 AFAP1L2Q8N4X5 818 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 AMER3Q8N944 861 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 RCBTB1Q8NDN9 531 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 WDR48Q8TAF3 677 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 IFI44Q8TCB0 444 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TEX37Q96LM6 180 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 COQ7Q99807 217 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TMEM121BQ9BXQ6 578 aaPredicted RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 PELI2Q9HAT8 420 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 SAR1AQ9NR31 198 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TMEM184CQ9NVA4 438 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 LHX6Q9UPM6 363 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 DLGAP4Q9Y2H0 992 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 STK38LQ9Y2H1 464 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 POLR3HQ9Y535 204 aaPredicted RBP9.83□□□□□ -0.84
USP39-210ENST00000459775 PCM1Q15154 2024 aa9.83□□□□□ -0.84
USP39-210ENST00000459775 TPRP12270 2363 aaKnown RBP9.82□□□□□ -0.84
USP39-210ENST00000459775 A0A0J9YY10 115 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 OR2A25A4D2G3 310 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 P2RX6O15547 441 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 RPLP0P05388 317 aaKnown RBP9.82□□□□□ -0.84
USP39-210ENST00000459775 SCTRP47872 440 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 GPR85P60893 370 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 HKDC1Q2TB90 917 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 PAGE2BQ5JRK9 111 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 RAB12Q6IQ22 244 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 KRT78Q8N1N4 520 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 FAM181AQ8N9Y4 354 aa9.82□□□□□ -0.84
USP39-210ENST00000459775 FNDC5Q8NAU1 212 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms