RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SLCO1A2P46721 670 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 HERVK_113P63132 956 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 IFFO1Q0D2I5 559 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 CUL3Q13618 768 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 B3GNTL1Q67FW5 361 aaPredicted RBP21.75■■□□□ 1.07
CBX3-204ENST00000456948 EMBQ6PCB8 327 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 SLC5A8Q8N695 610 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 PSMF1Q92530 271 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 HAS2Q92819 552 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 SERPINI1Q99574 410 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 C1QTNF3Q9BXJ4 246 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 ERVK-6Q9BXR3 956 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 ELOVL6Q9H5J4 265 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 ZBTB20Q9HC78 741 aaPredicted RBP21.75■■□□□ 1.07
CBX3-204ENST00000456948 GRID1Q9ULK0 1009 aa21.75■■□□□ 1.07
CBX3-204ENST00000456948 SMIM23A6NLE4 172 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 OR7A17O14581 309 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 CTNSO60931 367 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 SH3BGRLO75368 114 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 SUPT7LO94864 414 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 SHBGP04278 402 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 RPS17P08708 135 aaKnown RBP21.74■■□□□ 1.07
CBX3-204ENST00000456948 SOX11P35716 441 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 HSD17B3P37058 310 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 NAA20P61599 178 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 RPS13P62277 151 aaKnown RBP21.74■■□□□ 1.07
CBX3-204ENST00000456948 VSNL1P62760 191 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 ZNF33BQ06732 778 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 STX4Q12846 297 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 BIKQ13323 160 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 ZNF169Q14929 603 aaPredicted RBP21.74■■□□□ 1.07
CBX3-204ENST00000456948 INPP5JQ15735 1006 aaPredicted RBP21.74■■□□□ 1.07
CBX3-204ENST00000456948 GGTA1PQ4G0N0 100 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 FRG2Q64ET8 278 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 WDR93Q6P2C0 686 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 MYRIPQ8NFW9 859 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 FRG2BQ96QU4 278 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.74■■□□□ 1.07
CBX3-204ENST00000456948 NMRK1Q9NWW6 199 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 LUZP4Q9P127 313 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 PHF11Q9UIL8 331 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 PPT2Q9UMR5 302 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 SNX6Q9UNH7 406 aa21.74■■□□□ 1.07
CBX3-204ENST00000456948 SAP18O00422 153 aaKnown RBP21.73■■□□□ 1.07
CBX3-204ENST00000456948 CDK2AP1O14519 115 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 SCELO95171 688 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 TUBBP07437 444 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 IMPDH1P20839 514 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 CPN2P22792 545 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 CD97P48960 835 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 SLC26A5P58743 744 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 SLAMF1Q13291 335 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 SERTAD2Q14140 314 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 TERF2Q15554 542 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 IGFBP7Q16270 282 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 MEP1AQ16819 746 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 CCDC153Q494R4 210 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 CYP20A1Q6UW02 462 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 SHISA5Q8N114 240 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 RIBC1Q8N443 379 aaPredicted RBP21.73■■□□□ 1.07
CBX3-204ENST00000456948 TMEM151AQ8N4L1 468 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 FAM47BQ8NA70 645 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 OR52B6Q8NGF0 335 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 ZNF483Q8TF39 744 aaPredicted RBP21.73■■□□□ 1.07
CBX3-204ENST00000456948 MIB2Q96AX9 1013 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 CDK15Q96Q40 435 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 RNF32Q9H0A6 362 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 AGPAT4Q9NRZ5 378 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 COPG1Q9Y678 874 aaKnown RBP21.73■■□□□ 1.07
CBX3-204ENST00000456948 NBASA2RRP1 2371 aa21.73■■□□□ 1.07
CBX3-204ENST00000456948 IGKV3D-11A0A0A0MRZ8 115 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 TRAV17A0A0B4J275 112 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 CCDC151A5D8V7 595 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 SAGE2PA6NJ88 616 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 CYR61O00622 381 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 MLYCDO95822 493 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 CELA2AP08217 269 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 PPP2R1BP30154 601 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 CLCQ05315 142 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 UBE3DQ7Z6J8 389 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 SCUBE1Q8IWY4 988 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 ZCCHC7Q8N3Z6 543 aaKnown RBP21.72■■□□□ 1.07
CBX3-204ENST00000456948 Q8NA96 180 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 WDR20Q8TBZ3 569 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 MZB1Q8WU39 189 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 NECTIN3Q9NQS3 549 aa21.72■■□□□ 1.07
CBX3-204ENST00000456948 PNO1Q9NRX1 252 aaKnown RBP21.72■■□□□ 1.07
CBX3-204ENST00000456948 A0A1W2PPM1 405 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 TLDC2A0PJX2 215 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 RTCAO00442 366 aaKnown RBP21.71■■□□□ 1.07
CBX3-204ENST00000456948 COPEO14579 308 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 SEMA3DO95025 777 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 IFNA16P05015 189 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 SBK3P0C264 359 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 MYL2P10916 166 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 CRHR1P34998 444 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 BUD31P41223 144 aaPredicted RBP21.71■■□□□ 1.07
CBX3-204ENST00000456948 PRKAA2P54646 552 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 ACER2Q5QJU3 275 aa21.71■■□□□ 1.07
CBX3-204ENST00000456948 H3F3CQ6NXT2 135 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms