RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SCELO95171 688 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 ALDOAP04075 364 aaKnown RBP16.71■□□□□ 0.27
MSH6-207ENST00000456246 EEF1DP29692 281 aaKnown RBP16.71■□□□□ 0.27
MSH6-207ENST00000456246 GMPRP36959 345 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 CD96P40200 585 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 CLCN2P51788 898 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 ARFIP1P53367 373 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 LIM2P55344 173 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 PHEXP78562 749 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 IRF9Q00978 393 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 LIPJQ5W064 366 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 TEX9Q8N6V9 391 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 NFAM1Q8NET5 270 aaPredicted RBP16.71■□□□□ 0.27
MSH6-207ENST00000456246 OR7G3Q8NG95 312 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 KIF18AQ8NI77 898 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 IFT81Q8WYA0 676 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 ISL2Q96A47 359 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 REPS1Q96D71 796 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 VMP1Q96GC9 406 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 F2RL3Q96RI0 385 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 CDCP1Q9H5V8 836 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 PRDM7Q9NQW5 492 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 LRFN1Q9P244 771 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 TMCO1Q9UM00 188 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 PCDHGA11Q9Y5H2 935 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 DIDO1Q9BTC0 2240 aaKnown RBP16.7■□□□□ 0.26
MSH6-207ENST00000456246 CYR61O00622 381 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 KRT38O76015 456 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 MYO1DO94832 1006 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 ACSL3O95573 720 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 PCNAP12004 261 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 PIK3CBP42338 1070 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 CYB561P49447 251 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 MLF1P58340 268 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 RBPJQ06330 500 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 PCBP2Q15366 365 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■■■ 32.2
MSH6-207ENST00000456246 ELAVL1Q15717 326 aaKnown RBP16.7■□□□□ 0.26
MSH6-207ENST00000456246 PFKFB4Q16877 469 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 TSNAXIP1Q2TAA8 658 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 AP5B1Q2VPB7 878 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 ADNP2Q6IQ32 1131 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 GFRALQ6UXV0 394 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 MAMDC2Q7Z304 686 aaPredicted RBP16.7■□□□□ 0.26
MSH6-207ENST00000456246 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 AMER2Q8N7J2 671 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 APCDD1LQ8NCL9 501 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 SIGLEC12Q96PQ1 595 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 CCDC77Q9BR77 488 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 VPS11Q9H270 941 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 TRIM45Q9H8W5 580 aaPredicted RBP16.7■□□□□ 0.26
MSH6-207ENST00000456246 SEC14L3Q9UDX4 400 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 ZNF180Q9UJW8 692 aa16.7■□□□□ 0.26
MSH6-207ENST00000456246 TRBV11-1A0A0K0K1C0 115 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 ASPDHA6ND91 283 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 CTNSO60931 367 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 RBP1P09455 135 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 RNF224P0DH78 156 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 COL6A2P12110 1019 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 HIST1H1TP22492 207 aaPredicted RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 ATP5A1P25705 553 aaKnown RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 TPP2P29144 1249 aaPredicted RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 TRHRP34981 398 aaPredicted RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 MAGEA12P43365 314 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 SERTAD2Q14140 314 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 SLC25A25Q6KCM7 469 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 CEP112Q8N8E3 955 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 ACOT4Q8N9L9 421 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 DAZLQ92904 295 aaKnown RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 TMEM125Q96AQ2 219 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 GPR78Q96P69 363 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 PAFAH2Q99487 392 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 ACTR8Q9H981 624 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 PNO1Q9NRX1 252 aaKnown RBP16.69■□□□□ 0.26
MSH6-207ENST00000456246 MS4A12Q9NXJ0 267 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 ANKRD10Q9NXR5 420 aa16.69■□□□□ 0.26
MSH6-207ENST00000456246 A0A087WUV0 522 aaPredicted RBP16.68■□□□□ 0.26
MSH6-207ENST00000456246 A8MUA0 341 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 LRRTM2O43300 516 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 MAN1A2O60476 641 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 SLC25A12O75746 678 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 NEURL1O76050 574 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 SP1P08047 785 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 ECHS1P30084 290 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 SSR2P43308 183 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 HLCSP50747 726 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 RAP1GDS1P52306 607 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
MSH6-207ENST00000456246 STX4Q12846 297 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 GTF2H2Q13888 395 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 TECRLQ5HYJ1 363 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 DEPDC1Q5TB30 811 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 SPINK14Q6IE38 97 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 GTF2H2CQ6P1K8 395 aa16.68■□□□□ 0.26
MSH6-207ENST00000456246 MYLK4Q86YV6 388 aaPredicted RBP16.68■□□□□ 0.26
MSH6-207ENST00000456246 KLHL1Q9NR64 748 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms