RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 PPP3R2Q96LZ3 170 aa13.73□□□□□ -0.21
LAMA4-209ENST00000453937 WDR55Q9H6Y2 383 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-209ENST00000453937 WDR54Q9H977 334 aa13.73□□□□□ -0.21
LAMA4-209ENST00000453937 MKKSQ9NPJ1 570 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-209ENST00000453937 ASIC5Q9NY37 505 aa13.73□□□□□ -0.21
LAMA4-209ENST00000453937 EXO1Q9UQ84 846 aaKnown RBP13.73□□□□□ -0.21
LAMA4-209ENST00000453937 ATG4BQ9Y4P1 393 aa13.73□□□□□ -0.21
LAMA4-209ENST00000453937 PCDHGA6Q9Y5G7 932 aa13.73□□□□□ -0.21
LAMA4-209ENST00000453937 CLDN16Q9Y5I7 305 aa13.73□□□□□ -0.21
LAMA4-209ENST00000453937 A0A1W2PR48 441 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 FAM227AF5H4B4 570 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PROM1O43490 865 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PCDH7O60245 1069 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 SEC22BO75396 215 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 JRKO75564 520 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 RECKO95980 971 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 CCNYL3P0C7X3 344 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PIM1P11309 404 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 RNH1P13489 461 aaKnown RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 SDC1P18827 310 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 AGXTP21549 392 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 IL10P22301 178 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 TACR1P25103 407 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 EPHA3P29320 983 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 XCR1P46094 333 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 IDH3AP50213 366 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 HNRNPFP52597 415 aaKnown RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PCBP4P57723 403 aaKnown RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 RAB38P57729 211 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 TRA2BP62995 288 aaKnown RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 SKP1P63208 163 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 EMX2Q04743 252 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 VWA2Q5GFL6 755 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PAGE2Q7Z2X7 111 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 LAPTM4BQ86VI4 370 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 STT3BQ8TCJ2 826 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 UCN3Q969E3 161 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 COL26A1Q96A83 441 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 TUBGCP3Q96CW5 907 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PPP1R36Q96LQ0 422 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 OR1F2PQ96R84 312 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 OR52B2Q96RD2 323 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 CSF3RQ99062 836 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 EBF4Q9BQW3 602 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 CCDC86Q9H6F5 360 aaKnown RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 COPS7BQ9H9Q2 264 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PFDN4Q9NQP4 134 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 RIC8BQ9NVN3 520 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 LYARQ9NX58 379 aaKnown RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 TEX10Q9NXF1 929 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 IFT80Q9P2H3 777 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-209ENST00000453937 TRPC4Q9UBN4 977 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 CROTQ9UKG9 612 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 PCSK5Q92824 1860 aa13.72□□□□□ -0.21
LAMA4-209ENST00000453937 C1QTNF9BB2RNN3 333 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 C21orf140B9A014 251 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 VPS4BO75351 444 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 UMODP07911 640 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 ALDOCP09972 364 aaKnown RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 ZGLP1P0C6A0 271 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 C1QTNF9P0C862 333 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 BCKDHAP12694 445 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 TCN2P20062 427 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 DRD4P21917 467 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 SEC24CP53992 1094 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 AQP5P55064 265 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 RPL38P63173 70 aaKnown RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 RHAGQ02094 409 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 SRSF6Q13247 344 aaKnown RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 DNASE1L3Q13609 305 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 GALNTL6Q49A17 601 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 CCNYL2Q5T2Q4 361 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 FAM69BQ5VUD6 431 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 RIPOR1Q6ZS17 1223 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 GPR180Q86V85 440 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 SCUBE1Q8IWY4 988 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 ENDOVQ8N8Q3 282 aaKnown RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 C16orf78Q8WTQ4 265 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 TBC1D20Q96BZ9 403 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 CHMP6Q96FZ7 201 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 PEX11GQ96HA9 241 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 EGLN2Q96KS0 407 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 EBPLQ9BY08 206 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 ZNF282Q9UDV7 671 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 IL17BQ9UHF5 180 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 FBXW2Q9UKT8 454 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 CES1P1Q9UKY3 287 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 FARSAQ9Y285 508 aaKnown RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 POLR3HQ9Y535 204 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-209ENST00000453937 IGF2RP11717 2491 aa13.71□□□□□ -0.21
LAMA4-209ENST00000453937 SCN2AQ99250 2005 aa13.71□□□□□ -0.22
LAMA4-209ENST00000453937 CACNA1GO43497 2377 aa13.71□□□□□ -0.22
LAMA4-209ENST00000453937 IGKV3D-11A0A0A0MRZ8 115 aa13.7□□□□□ -0.22
LAMA4-209ENST00000453937 GOLGA8QA0A0J9YX86 632 aa13.7□□□□□ -0.22
LAMA4-209ENST00000453937 GOLGA8OA6NCC3 632 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms