RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 INAQ16352 499 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 MEP1AQ16819 746 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 KHDRBS2Q5VWX1 349 aaKnown RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF324BQ6AW86 544 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 CHSY3Q70JA7 882 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 GSPT2Q8IYD1 628 aaKnown RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 LGI4Q8N135 537 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 BEST3Q8N1M1 668 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 ARMC10Q8N2F6 343 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 KIF2BQ8N4N8 673 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 ACOT4Q8N9L9 421 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 APCDD1LQ8NCL9 501 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 ARMC2Q8NEN0 867 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 WDR20Q8TBZ3 569 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 FAR1Q8WVX9 515 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 PHF21BQ96EK2 531 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 MAPKAP1Q9BPZ7 522 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 MRPL57Q9BQC6 102 aaKnown RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 NTMT1Q9BV86 223 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 ROGDIQ9GZN7 287 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 OR51B5Q9H339 312 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 ACTR8Q9H981 624 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 COPS7BQ9H9Q2 264 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 LYRM4Q9HD34 91 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 DMRT3Q9NQL9 472 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 FETUBQ9UGM5 382 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 PCTPQ9UKL6 214 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 PPIEQ9UNP9 301 aaKnown RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 RNF11Q9Y3C5 154 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
HSPG2-207ENST00000453796 SETXQ7Z333 2677 aaKnown RBP13.63□□□□□ -0.23
HSPG2-207ENST00000453796 LRRK2Q5S007 2527 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 A8MUA0 341 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 CLDN4O14493 209 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 PLPP1O14494 284 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 SH3BGRLO75368 114 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 RPS17P08708 135 aaKnown RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 HIST1H1TP22492 207 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 PPP2R1BP30154 601 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 GPR143P51810 404 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 ARFIP1P53367 373 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 TUBA3CQ13748 450 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 TERF2Q15554 542 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 EIF2S3LQ2VIR3 472 aaKnown RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 TUBA3EQ6PEY2 450 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 CYP4X1Q8N118 509 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 ST6GALNAC3Q8NDV1 305 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MDS2Q8NDY4 140 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 OR52B6Q8NGF0 335 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MZB1Q8WU39 189 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MTBPQ96DY7 904 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 SCYL1Q96KG9 808 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 NSUN5Q96P11 429 aaKnown RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 SIGLEC12Q96PQ1 595 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 TAAR6Q96RI8 345 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MTERF1Q99551 399 aaKnown RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF717Q9BY31 904 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MRPL46Q9H2W6 279 aaKnown RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 AGPAT4Q9NRZ5 378 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF223Q9UK11 482 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 MRPS33Q9Y291 106 aaKnown RBP13.62□□□□□ -0.23
HSPG2-207ENST00000453796 PCDHGB6Q9Y5F9 930 aa13.62□□□□□ -0.23
HSPG2-207ENST00000453796 A8MT66 165 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 SAP18O00422 153 aaKnown RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 PRAMEF2O60811 474 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 CTNSO60931 367 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 SMIM24O75264 130 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 ETHE1O95571 254 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 TNFRSF8P28908 595 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 SSR2P43308 183 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 TAS2R50P59544 299 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 RPS13P62277 151 aaKnown RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 TRAF3Q13114 568 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 DDX39BQ13838 428 aaKnown RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 RCN2Q14257 317 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 CPSF6Q16630 551 aaKnown RBP eCLIP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 AP5B1Q2VPB7 878 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 LGSNQ5TDP6 509 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 RPS27LQ71UM5 84 aaKnown RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 MYLK4Q86YV6 388 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 SLC5A8Q8N695 610 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 B3GNT7Q8NFL0 401 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 CDK15Q96Q40 435 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 SORBS1Q9BX66 1292 aaKnown RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 CDCP1Q9H5V8 836 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 NOL11Q9H8H0 719 aaKnown RBP13.61□□□□□ -0.23
HSPG2-207ENST00000453796 ADAP2Q9NPF8 381 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 PPT2Q9UMR5 302 aa13.61□□□□□ -0.23
HSPG2-207ENST00000453796 SYNDIG1LA6NDD5 238 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ANKUB1A6NFN9 424 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 GABRR3A8MPY1 467 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 CDK2AP1O14519 115 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 SEMA7AO75326 666 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms