RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NOBOXO60393 691 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 CMPK1P30085 196 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 MPLP40238 635 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 CCR8P51685 355 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ZNF33BQ06732 778 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SF1Q15637 639 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 C10orf62Q5T681 223 aaPredicted RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 ARMC6Q6NXE6 501 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 RNF165Q6ZSG1 346 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 OR10G6Q8NH81 332 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ZNF566Q969W8 418 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 FKBP10Q96AY3 582 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 WDR34Q96EX3 536 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 NSMCE2Q96MF7 247 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 CGREF1Q99674 301 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 NRTNQ99748 197 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 DUSP23Q9BVJ7 150 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 GAREM1Q9H706 876 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 MRPS30Q9NP92 439 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 FBXO8Q9NRD0 319 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 NLGN3Q9NZ94 848 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 GMPR2Q9P2T1 348 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 DAPK2Q9UIK4 370 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ZNF490Q9ULM2 529 aaPredicted RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 AP3M1Q9Y2T2 418 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 PCDHGB1Q9Y5G3 927 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ENTPD2Q9Y5L3 495 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 CORINQ9Y5Q5 1042 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 R4GN57 208 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 KCNE1BA0A087WTH5 132 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 FAM234BA2RU67 622 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 GSAPA4D1B5 854 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 OR6C74A6NCV1 312 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 RHPN2P1A8MT19 583 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 H0YIV9 168 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 J3QRK9 145 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SLC28A1O00337 649 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 TPST1O60507 370 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 MRPS14O60783 128 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 ALPLP05186 524 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 LINC00032P0C843 101 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 RAP2AP10114 183 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 EEF1B2P24534 225 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 HRH2P25021 359 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 PSMB5P28074 263 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 GRK3P35626 688 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 POLR2IP36954 125 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 SERPINB10P48595 397 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 PRDX1Q06830 199 aaKnown RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 ITGADQ13349 1161 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX17-204ENST00000453453 SHBQ15464 509 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 NDUFA5Q16718 116 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 IMPG1Q17R60 797 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SGO1Q5FBB7 561 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 FRG2Q64ET8 278 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 MED27Q6P2C8 311 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 OOSP2Q86WS3 158 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SFTPA2Q8IWL1 248 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ADGRF3Q8IZF5 1079 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SPARTQ8N0X7 666 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SLC25A45Q8N413 288 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 TBC1D19Q8N5T2 526 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 TMCO5AQ8N6Q1 288 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ARL10Q8N8L6 244 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 GPR156Q8NFN8 814 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 OR52E4Q8NGH9 312 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SELENOMQ8WWX9 145 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SDCCAG3Q96C92 435 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 CCDC115Q96NT0 180 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 FRG2BQ96QU4 278 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SLC38A3Q99624 504 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 AIF1LQ9BQI0 150 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 CHID1Q9BWS9 393 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
SNX17-204ENST00000453453 LHPPQ9H008 270 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 GMEB2Q9UKD1 530 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SH2B3Q9UQQ2 575 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SNX5Q9Y5X3 404 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 LILRA5A6NI73 299 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 C2orf74A8MZ97 194 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 BTN3A3O00478 584 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 RGS14O43566 566 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 FOXD2O60548 495 aaPredicted RBP15.13■□□□□ 0.01
SNX17-204ENST00000453453 FKBP9O95302 570 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 S100A1P23297 94 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 EIF2B2P49770 351 aaKnown RBP15.13■□□□□ 0.01
SNX17-204ENST00000453453 HNRNPFP52597 415 aaKnown RBP15.13■□□□□ 0.01
SNX17-204ENST00000453453 PLA2G16P53816 162 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 E2F2Q14209 437 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 FAM98BQ52LJ0 330 aaKnown RBP15.13■□□□□ 0.01
SNX17-204ENST00000453453 CATSPEREQ5SY80 951 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 LAIR1Q6GTX8 287 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 ADCK2Q7Z695 626 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 C17orf82Q86X59 251 aaPredicted RBP15.13■□□□□ 0.01
SNX17-204ENST00000453453 ZNF555Q8NEP9 628 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 OR2A1Q8NGT9 310 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 TUBGCP3Q96CW5 907 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms