RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PRAMEF2O60811 474 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 B4GALT2O60909 372 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 S100BP04271 92 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-208ENST00000451893 DRD4P21917 467 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 SCTRP47872 440 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 RAB8AP61006 207 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 CDKL1Q00532 357 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 REEP5Q00765 189 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 TSNQ15631 228 aaKnown RBP20.35■□□□□ 0.85
C9orf3-208ENST00000451893 NXPE4Q6UWF7 544 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 TMEM207Q6UWW9 146 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 GFRALQ6UXV0 394 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 SLC5A8Q8N695 610 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 RHEBL1Q8TAI7 183 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 M1APQ8TC57 530 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 NT5CQ8TCD5 201 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 SCYL1Q96KG9 808 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 SARGQ9BW04 601 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 DERL2Q9GZP9 239 aa20.35■□□□□ 0.85
C9orf3-208ENST00000451893 C12orf65Q9H3J6 166 aaKnown RBP20.35■□□□□ 0.85
C9orf3-208ENST00000451893 MAGEB17A8MXT2 336 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 NDUFAB1O14561 156 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 CHST10O43529 356 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 MYL2P10916 166 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 GNAZP19086 355 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 STXBP1P61764 594 aaKnown RBP20.34■□□□□ 0.85
C9orf3-208ENST00000451893 OC90Q02509 493 aaPredicted RBP20.34■□□□□ 0.85
C9orf3-208ENST00000451893 PPP1R3AQ16821 1122 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 TOR1AIP1Q5JTV8 583 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 ZYG11AQ6WRX3 759 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 LRRC34Q8IZ02 419 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 BEST3Q8N1M1 668 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 KRT78Q8N1N4 520 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 PLPP5Q8NEB5 264 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 NR4A3Q92570 626 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 TSLPQ969D9 159 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 PTCHD1Q96NR3 888 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 UTP23Q9BRU9 249 aaKnown RBP20.34■□□□□ 0.85
C9orf3-208ENST00000451893 UNKQ9C0B0 810 aaKnown RBP20.34■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF358Q9NW07 568 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 IKZF3Q9UKT9 509 aa20.34■□□□□ 0.85
C9orf3-208ENST00000451893 DIDO1Q9BTC0 2240 aaKnown RBP20.33■□□□□ 0.85
C9orf3-208ENST00000451893 A0A088AWK7 358 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 A0A1B0GUH1 482 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 WDR91A4D1P6 747 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 E2F3O00716 465 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 CLGNO14967 610 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 PRMT3O60678 531 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 SNUPNO95149 360 aaKnown RBP20.33■□□□□ 0.85
C9orf3-208ENST00000451893 RNH1P13489 461 aaKnown RBP20.33■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF10P21506 573 aaPredicted RBP20.33■□□□□ 0.85
C9orf3-208ENST00000451893 ALDH3A1P30838 453 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 EFNA3P52797 238 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 RHAGQ02094 409 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 RBPJQ06330 500 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 ZNF766Q5HY98 468 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 ACER2Q5QJU3 275 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 TCAIMQ8N3R3 496 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 TMEM151AQ8N4L1 468 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 AFAP1L2Q8N4X5 818 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 HORMAD2Q8N7B1 307 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 TTLQ8NG68 377 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 PPP1R14CQ8TAE6 165 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 SLX1AQ9BQ83 275 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 SPNS1Q9H2V7 528 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 TMCO1Q9UM00 188 aa20.33■□□□□ 0.85
C9orf3-208ENST00000451893 MAST4O15021 2626 aa20.33■□□□□ 0.84
C9orf3-208ENST00000451893 G3V2L1 256 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 TRIM13O60858 407 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 EDF1O60869 148 aaKnown RBP20.32■□□□□ 0.84
C9orf3-208ENST00000451893 MLYCDO95822 493 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 B3GALT4O96024 378 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 SERPINE1P05121 402 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 CD1DP15813 335 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 DLG1Q12959 904 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 STX3Q13277 289 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 PCLAFQ15004 111 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 ZXDCQ2QGD7 858 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-208ENST00000451893 GKAP1Q5VSY0 366 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-208ENST00000451893 FJX1Q86VR8 437 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 SLC22A9Q8IVM8 553 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 SNX31Q8N9S9 440 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 FAM98AQ8NCA5 519 aaKnown RBP20.32■□□□□ 0.84
C9orf3-208ENST00000451893 DNAJB8Q8NHS0 232 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 STAG3L4Q8TBR4 150 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 UTP15Q8TED0 518 aaKnown RBP20.32■□□□□ 0.84
C9orf3-208ENST00000451893 ANKRD49Q8WVL7 239 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 EXT2Q93063 718 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 MMP25Q9NPA2 562 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 THAP1Q9NVV9 213 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 OXSMQ9NWU1 459 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 ANKRD10Q9NXR5 420 aa20.32■□□□□ 0.84
C9orf3-208ENST00000451893 ANKDD1BA6NHY2 528 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 TGDSO95455 350 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 SERPINA6P08185 405 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 C1GALT1C1LP0DN25 315 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 CD46P15529 392 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 BGNP21810 368 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 ATP5F1P24539 256 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-208ENST00000451893 CASP6P55212 293 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms