RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 A0A096LPI6 279 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR2A25A4D2G3 310 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SEC14L6B5MCN3 397 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CBX4O00257 560 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DPYSL4O14531 572 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GABRDO14764 452 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 B4GALT5O43286 388 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR10H3O60404 316 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ALDH1A2O94788 518 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ABLIM3O94929 683 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CHRM5P08912 532 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 SFTPCP11686 197 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DAOP14920 347 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GNSP15586 552 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 UGT2B7P16662 529 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ITPKAP23677 461 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ADORA2AP29274 412 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SCNN1AP37088 669 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CAP2P40123 477 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ASPAP45381 313 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MAP2K4P45985 399 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TTPAP49638 278 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GATMP50440 423 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IDH3GP51553 393 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 CLCNKAP51800 687 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IL2P60568 153 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RPS8P62241 208 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 ADAM8P78325 824 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KCNJ10P78508 379 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 EMX1Q04741 257 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF543Q08ER8 600 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PMPCAQ10713 525 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PDZK1IP1Q13113 114 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 EXOSC2Q13868 293 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 GTF2H2Q13888 395 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MAD2L1BPQ15013 274 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 RAB11BQ15907 218 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IQCJQ1A5X6 159 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 LRRC26Q2I0M4 334 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 UBE2NLQ5JXB2 153 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RAP1GAP2Q684P5 730 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GTF2H2CQ6P1K8 395 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CERS6Q6ZMG9 384 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OTOP1Q7RTM1 612 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GPAT4Q86UL3 456 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NAA40Q86UY6 237 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 THEM5Q8N1Q8 247 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KCNRGQ8N5I3 272 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 C10orf53Q8N6V4 93 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CYP2W1Q8TAV3 490 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 BTN2A2Q8WVV5 523 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ST8SIA2Q92186 375 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 EDAQ92838 391 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 C16orf58Q96GQ5 468 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PRMT6Q96LA8 375 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 MGLLQ99685 303 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NUDT16L1Q9BRJ7 211 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 NDC1Q9BTX1 674 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 UBQLN3Q9H347 655 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DPEP2Q9H4A9 486 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZFP14Q9HCL3 533 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MRPS30Q9NP92 439 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 SIX2Q9NPC8 291 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MEPEQ9NQ76 525 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 C1GALT1Q9NS00 363 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ABCC13Q9NSE7 274 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TAS2R14Q9NYV8 317 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NOCTQ9UK39 431 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 DKKL1Q9UK85 242 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC6A5Q9Y345 797 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RNF11Q9Y3C5 154 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TRAV6A0A075B6T7 132 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM230AA0A1W2PPH8 454 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC12A8A0AV02 714 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 HYKKA2RU49 373 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 DBX1A6NMT0 343 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SNRPGP15A8MWD9 76 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF670-ZNF695F2Z2N8 137 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RFXAPO00287 272 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NPC1O15118 1278 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FABP7O15540 132 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FLRT2O43155 660 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 HRO43593 1189 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KDELR3O43731 214 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OR2T1O43869 369 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FOXD2O60548 495 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 XYLBO75191 536 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CREG1O75629 220 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TSPAN15O95858 294 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ALDOBP05062 364 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SCG5P05408 212 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SERPIND1P05546 499 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACSM4P0C7M7 580 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZSCAN5DPP0CG00 497 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RNH1P13489 461 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 IL2RBP14784 551 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CPN1P15169 458 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MGMTP16455 207 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CHRM3P20309 590 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GABRB3P28472 473 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms