RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 CRLF3Q8IUI8 442 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 APCDD1LQ8NCL9 501 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF354BQ96LW1 612 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 NSUN5Q96P11 429 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 KCNC2Q96PR1 638 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 TAAR6Q96RI8 345 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 CSF3RQ99062 836 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 MAPKAP1Q9BPZ7 522 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 MRPL46Q9H2W6 279 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 NOL11Q9H8H0 719 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 TMCO1Q9UM00 188 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 PCDHGA11Q9Y5H2 935 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 A0A088AWK7 358 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 TRAV17A0A0B4J275 112 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 DYTNA2CJ06 578 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 SAGE2PA6NJ88 616 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 FOXE1O00358 373 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 SH3BGRLO75368 114 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ETHE1O95571 254 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 F10P00742 488 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 PCNAP12004 261 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF10P21506 573 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 HIST1H1TP22492 207 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 TNFRSF8P28908 595 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 EEF1DP29692 281 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 PPP2R1BP30154 601 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 BSGP35613 385 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 CD96P40200 585 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 PIK3CGP48736 1102 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 NEK2P51955 445 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ARG2P78540 354 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF33BQ06732 778 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 TGM3Q08188 693 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 TRAF3Q13114 568 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 MRPL49Q13405 166 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 TERF2Q15554 542 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ZRSR2Q15696 482 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 LGI4Q8N135 537 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 OR52B6Q8NGF0 335 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ADAMTS18Q8TE60 1221 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 FAR1Q8WVX9 515 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 MTERF1Q99551 399 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 SORBS1Q9BX66 1292 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ACTR8Q9H981 624 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 KCNK13Q9HB14 408 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 DMRT3Q9NQL9 472 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 PRTFDC1Q9NRG1 225 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 TMEM216Q9P0N5 145 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF225Q9UK10 706 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF223Q9UK11 482 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 PPT2Q9UMR5 302 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ANGPTL3Q9Y5C1 460 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
RTFDC1-204ENST00000449062 OR5H15A6NDH6 313 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 A8MUA0 341 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 SAP18O00422 153 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 CLDN4O14493 209 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 PLPP1O14494 284 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 CLDN9O95484 217 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 RPS17P08708 135 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 RPS13P62277 151 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 CUL3Q13618 768 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 TUBA3CQ13748 450 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 CPSF6Q16630 551 aaKnown RBP eCLIP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 EIF2S3LQ2VIR3 472 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 AP5B1Q2VPB7 878 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 MRM1Q6IN84 353 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 TUBA3EQ6PEY2 450 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 RPS27LQ71UM5 84 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 RPS19BP1Q86WX3 136 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF227Q86WZ6 799 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 CYP4X1Q8N118 509 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 BEST3Q8N1M1 668 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 FAM26EQ8N5C1 309 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 MDS2Q8NDY4 140 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 PTPMT1Q8WUK0 201 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 RGMAQ96B86 450 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 ANKRD9Q96BM1 317 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 SCYL1Q96KG9 808 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 CDK15Q96Q40 435 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 DDX31Q9H8H2 851 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 TRIM45Q9H8W5 580 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-204ENST00000449062 ANKZF1Q9H8Y5 726 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms