RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CBLBQ13191 982 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PMS2P3Q13401 168 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ASTE1Q2TB18 679 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TMEM63BQ5T3F8 832 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 GALNT12Q8IXK2 581 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 YIPF7Q8N8F6 280 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 XYLT2Q9H1B5 865 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 C14orf166Q9Y224 244 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 DLGAP4Q9Y2H0 992 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 A8MVJ9 347 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 H3BNC9 293 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SLC22A1O15245 554 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CSTAP01040 98 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 AHSGP02765 367 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 DBIP07108 87 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ITGA5P08648 1049 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ACTA2P62736 377 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ACTG2P63267 376 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 DSC3Q14574 896 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TYSND1Q2T9J0 566 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CDH24Q86UP0 819 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 LGI4Q8N135 537 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 KCT2Q8NC54 265 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 OR52J3Q8NH60 311 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 HPF1Q9NWY4 346 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 AASSQ9UDR5 926 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SAP18O00422 153 aaKnown RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 DLX2Q07687 328 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 SLC5A9Q2M3M2 681 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 GRHL2Q6ISB3 625 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 BAIAP2L2Q6UXY1 529 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ZUFSPQ96AP4 578 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 CASD1Q96PB1 797 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ACTRT3Q9BYD9 372 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TPT1P8Q9HAU6 139 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 C11orf16Q9NQ32 467 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 CENPMQ9NSP4 180 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TTC24A2A3L6 582 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 FAM172BPA6NC97 362 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TLR4O00206 839 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TNFRSF21O75509 655 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 THBS2P35442 1172 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TUBA1BP68363 451 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TUBA4AP68366 448 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 HSD11B2P80365 405 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 BDH1Q02338 343 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 SLAMF1Q13291 335 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 DAG1Q14118 895 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 GPR107Q5VW38 600 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 BORAQ6PGQ7 559 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 NXPE4Q6UWF7 544 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TUBA1AQ71U36 451 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PPP1R35Q8TAP8 253 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 RAB39BQ96DA2 213 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 AURKBQ96GD4 344 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TVP23BQ9NYZ1 205 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TMEM59LQ9UK28 342 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ADAM18Q9Y3Q7 739 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 A0A0J9YY10 115 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 MID1O15344 667 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PGAM2P15259 253 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 FPR1P21462 350 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 HNRNPA1L2Q32P51 320 aaKnown RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 SLCO6A1Q86UG4 719 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ZFAND4Q86XD8 727 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 LRRN4Q8WUT4 740 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ABCB10Q9NRK6 738 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 NXT1Q9UKK6 140 aaKnown RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PPM1HQ9ULR3 514 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 IQCMA0A1B0GVH7 501 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 A0A1W2PRQ8 180 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ABRAXAS2Q15018 415 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 MLC1Q15049 377 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TLDC1Q6P9B6 456 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 NUP43Q8NFH3 380 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 RHBDD1Q8TEB9 315 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TWNKQ96RR1 684 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TIMM29Q9BSF4 260 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 GRHL1Q9NZI5 618 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PFDN2Q9UHV9 154 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PCDHB14Q9Y5E9 798 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 DNAJB6O75190 326 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 HLA-DPB1P04440 258 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF28P17035 718 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 GATMP50440 423 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ADGRE1Q14246 886 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 FAM26DQ5JW98 314 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 FRMD7Q6ZUT3 714 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 GPR137CQ8N3F9 429 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PSD4Q8NDX1 1056 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 GRHL3Q8TE85 626 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 SLC7A6OSQ96CW6 309 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 CENPOQ9BU64 300 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 POLR2J2Q9GZM3 115 aaKnown RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 CDH10Q9Y6N8 788 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 FAM170BA6NMN3 283 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 TRA2BP62995 288 aaKnown RBP8.22□□□□□ -1.09
PTPN3-204ENST00000446349 SLC18A2Q05940 514 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms