RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 C16orf59Q7L2K0 433 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 DENND1CQ8IV53 801 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 PHC2Q8IXK0 858 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 NIPAL2Q9H841 368 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 GKN1Q9NS71 199 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ING3Q9NXR8 418 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 FTSJ1Q9UET6 329 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ZAR1LA6NP61 321 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 IGLV3-27P01718 113 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 SDC2P34741 201 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 EVI2BP34910 448 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 HMGCLP35914 325 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 MAPK12P53778 367 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ALDH6A1Q02252 535 aaKnown RBP19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ATXN7L2Q5T6C5 722 aaPredicted RBP19.41■□□□□ 0.7
SHOX2-203ENST00000441443 GRAMD2AQ8IUY3 354 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 OR4M2Q8NGB6 313 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 OR8J2Q8NGG1 315 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ZBED6CLQ96FA7 236 aaPredicted RBP19.41■□□□□ 0.7
SHOX2-203ENST00000441443 GALNT9Q9HCQ5 603 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 GABRR3A8MPY1 467 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 TPST2O60704 377 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ARHGEF15O94989 841 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 AP2S1P53680 142 aaPredicted RBP19.41■□□□□ 0.7
SHOX2-203ENST00000441443 POU6F2P78424 691 aaPredicted RBP19.41■□□□□ 0.7
SHOX2-203ENST00000441443 SEMG2Q02383 582 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 NFATC2Q13469 925 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 TJAP1Q5JTD0 557 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 FAM205BPQ63HN1 556 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 FUT10Q6P4F1 479 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 TRIM69Q86WT6 500 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 SYT14Q8NB59 555 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 GALNT6Q8NCL4 622 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 C19orf18Q8NEA5 215 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 UPRTQ96BW1 309 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 ATG10Q9H0Y0 220 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 TMEM245Q9H330 911 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 COMMD3Q9UBI1 195 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 C1orf226A1L170 272 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 SHOXO15266 292 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 PDE9AO76083 593 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 GADD45GO95257 159 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 GJB5O95377 273 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 RHOCP08134 193 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 RPS3P23396 243 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHOX2-203ENST00000441443 DDI2Q5TDH0 399 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 TIGD3Q6B0B8 471 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 GDPGP1Q6ZNW5 385 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 NFKBIDQ8NI38 313 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 CHTF18Q8WVB6 975 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 NDUFB11Q9NX14 153 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 CRLS1Q9UJA2 301 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 TMCC3Q9ULS5 477 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 WASHC1A8K0Z3 465 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 C1SP09871 688 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 SLC2A2P11168 524 aaPredicted RBP19.4■□□□□ 0.7
SHOX2-203ENST00000441443 ITGB7P26010 798 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 HKDC1Q2TB90 917 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 WSCD2Q2TBF2 565 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 LAS2Q8IYD9 372 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 FAM46DQ8NEK8 389 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 KLHL6Q8WZ60 621 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 TMEM80Q96HE8 168 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 RDH14Q9HBH5 336 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 IL26Q9NPH9 171 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 GPATCH2Q9NW75 528 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 SH3BP4Q9P0V3 963 aa19.4■□□□□ 0.7
SHOX2-203ENST00000441443 FAM240BA0A1B0GVZ2 78 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 A0A1W2PQ45 241 aaPredicted RBP19.39■□□□□ 0.69
SHOX2-203ENST00000441443 A0A1W2PQY0 241 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 ZNF30P17039 623 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 TM4SF4P48230 202 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 CYP4F8P98187 520 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 CDH18Q13634 790 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 TRIQKQ629K1 86 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 UBE2R2Q712K3 238 aaPredicted RBP19.39■□□□□ 0.69
SHOX2-203ENST00000441443 SCLYQ96I15 445 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 MSLNLQ96KJ4 702 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 MAPKAP1Q9BPZ7 522 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 TMEM121BQ9BXQ6 578 aaPredicted RBP19.39■□□□□ 0.69
SHOX2-203ENST00000441443 NMNAT1Q9HAN9 279 aaPredicted RBP19.39■□□□□ 0.69
SHOX2-203ENST00000441443 SLC25A19Q9HC21 320 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 PRAMEF33A0A0G2JMD5 474 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 LOC102723532A0A0G2JNH3 316 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 H3BNC9 293 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 TLR4O00206 839 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 SEC14L5O43304 696 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 PRAMEF10O60809 474 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 PRPH2P23942 346 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 CHIT1Q13231 466 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 P2RY14Q15391 338 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 FAM26DQ5JW98 314 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 Q8N402 240 aa19.39■□□□□ 0.69
SHOX2-203ENST00000441443 POLR2CP19387 275 aaPredicted RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 BOP1Q14137 746 aaKnown RBP19.38■□□□□ 0.69
SHOX2-203ENST00000441443 TEAD4Q15561 434 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 CPTPQ5TA50 214 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 PDZD3Q86UT5 571 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 TIGD4Q8IY51 512 aa19.38■□□□□ 0.69
SHOX2-203ENST00000441443 OR4A15Q8NGL6 344 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms