RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 TRAF6Q9Y4K3 522 aa17.22■□□□□ 0.35
PTX4-202ENST00000440447 HS3ST3B1Q9Y662 390 aa17.22■□□□□ 0.35
PTX4-202ENST00000440447 ARHGAP10A1A4S6 786 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 FAM227AF5H4B4 570 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 EEDO75530 441 aaKnown RBP17.21■□□□□ 0.35
PTX4-202ENST00000440447 ITGB2P05107 769 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 CHN1P15882 459 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 ABCE1P61221 599 aaKnown RBP17.21■□□□□ 0.35
PTX4-202ENST00000440447 RHDQ02161 417 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 STX3Q13277 289 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 TBR1Q16650 682 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 SH2D4BQ5SQS7 431 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 BORAQ6PGQ7 559 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 TRIM42Q8IWZ5 723 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 FAM47BQ8NA70 645 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 PLPP5Q8NEB5 264 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 MAPKAP1Q9BPZ7 522 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 ZNF717Q9BY31 904 aaPredicted RBP17.21■□□□□ 0.35
PTX4-202ENST00000440447 ACPTQ9BZG2 426 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 LYARQ9NX58 379 aaKnown RBP17.21■□□□□ 0.35
PTX4-202ENST00000440447 P4HTMQ9NXG6 502 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 MS4A12Q9NXJ0 267 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 KCMF1Q9P0J7 381 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 PHF11Q9UIL8 331 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 LHX6Q9UPM6 363 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 SCN3AQ9NY46 2000 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 EPG5Q9HCE0 2579 aa17.21■□□□□ 0.35
PTX4-202ENST00000440447 PKD1L2Q7Z442 2459 aa17.21■□□□□ 0.34
PTX4-202ENST00000440447 PTPRQQ9UMZ3 2332 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 ZZEF1O43149 2961 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 A0A0A6YYD5 115 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 OR2W5A6NFC9 320 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 ARGFXA6NJG6 315 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 CLDN4O14493 209 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 SOCS6O14544 535 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 ITM2AO43736 263 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 PRMT3O60678 531 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 SNUPNO95149 360 aaKnown RBP17.2■□□□□ 0.34
PTX4-202ENST00000440447 KLK1P06870 262 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 C8orf89P0DMQ9 161 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 ACPPP15309 386 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 CPN2P22792 545 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 ARRB2P32121 409 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 SLC1A6P48664 564 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 RRADP55042 308 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 HMGCS1Q01581 520 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 RHAGQ02094 409 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 TBL3Q12788 808 aaKnown RBP17.2■□□□□ 0.34
PTX4-202ENST00000440447 KANK2Q63ZY3 851 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 TMEM205Q6UW68 189 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 KIRREL2Q6UWL6 708 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 QSOX2Q6ZRP7 698 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 COMMD6Q7Z4G1 85 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 TRIM46Q7Z4K8 759 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 GPR180Q86V85 440 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 ZNF595Q8IYB9 648 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 EFCAB3Q8N7B9 438 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 AGR3Q8TD06 166 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 APOBEC4Q8WW27 367 aaKnown RBP17.2■□□□□ 0.34
PTX4-202ENST00000440447 EXTL1Q92935 676 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 FER1L6-AS2Q96M78 137 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 PTCHD1Q96NR3 888 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 PRDM9Q9NQV7 894 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 PRTFDC1Q9NRG1 225 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 C19orf25Q9UFG5 118 aaPredicted RBP17.2■□□□□ 0.34
PTX4-202ENST00000440447 ZDHHC2Q9UIJ5 367 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 KCNMB2Q9Y691 235 aa17.2■□□□□ 0.34
PTX4-202ENST00000440447 SLC28A1O00337 649 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 CYR61O00622 381 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 LYPLA1O75608 230 aaPredicted RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 GBAP04062 536 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 FAM58BPP0C7Q3 252 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 TLX1P31314 330 aaPredicted RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 EFNA3P52797 238 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 BTKQ06187 659 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 NSDHLQ15738 373 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 SPDYAQ5MJ70 313 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 CCNYL2Q5T2Q4 361 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 CES4AQ5XG92 561 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 MRM1Q6IN84 353 aaKnown RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 C1orf52Q8N6N3 182 aaKnown RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 TMEM102Q8N9M5 508 aaPredicted RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 OR11G2Q8NGC1 345 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 RAB3IL1Q8TBN0 382 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 CHTF18Q8WVB6 975 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 CSF3RQ99062 836 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 ARHGAP9Q9BRR9 750 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 ILKAPQ9H0C8 392 aaPredicted RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.19■□□□□ 0.34
PTX4-202ENST00000440447 MMACHCQ9Y4U1 282 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 DNAJC15Q9Y5T4 150 aa17.19■□□□□ 0.34
PTX4-202ENST00000440447 BLACEA4D250 179 aa17.18■□□□□ 0.34
PTX4-202ENST00000440447 TMEM233B4DJY2 109 aa17.18■□□□□ 0.34
PTX4-202ENST00000440447 RGS14O43566 566 aa17.18■□□□□ 0.34
PTX4-202ENST00000440447 TMPRSS11DO60235 418 aa17.18■□□□□ 0.34
PTX4-202ENST00000440447 TPP2P29144 1249 aaPredicted RBP17.18■□□□□ 0.34
PTX4-202ENST00000440447 BUD31P41223 144 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms